Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Mrdq2 | 5 | 7850368 | QTL | modifier of retinal degeneration QTL 2 | ||
Tssr48345 | 5 | 11 | + | TSS region | transcription start site region 48345 | |
Srrm4os | 5 | 26765 | + | antisense lncRNA gene | serine/arginine repetitive matrix 4, opposite strand | |
Srrm4 | 5 | 152542 | - | protein coding gene | serine/arginine repetitive matrix 4 | |
Tssr52863 | 5 | 11 | - | TSS region | transcription start site region 52863 | |
Cpgi16396 | 5 | 420 | CpG island | CpG island 16396 | ||
Cpgi16397 | 5 | 360 | CpG island | CpG island 16397 | ||
Tssr52864 | 5 | 33 | - | TSS region | transcription start site region 52864 | |
Cpgi16398 | 5 | 295 | CpG island | CpG island 16398 | ||
Gm42853 | 5 | 1386 | - | unclassified gene | predicted gene 42853 | |
4933430H06Rik | 5 | 1342 | - | unclassified gene | RIKEN cDNA 4933430H06 gene | |
Cpgi16399 | 5 | 421 | CpG island | CpG island 16399 | ||
Tssr52865 | 5 | 10 | - | TSS region | transcription start site region 52865 | |
Tssr52866 | 5 | 30 | - | TSS region | transcription start site region 52866 | |
Cpgi16400 | 5 | 160 | CpG island | CpG island 16400 | ||
Gm42854 | 5 | 968 | - | sense intronic lncRNA gene | predicted gene 42854 | |
Cpgi16401 | 5 | 1575 | CpG island | CpG island 16401 | ||
Tssr52867 | 5 | 11 | - | TSS region | transcription start site region 52867 | |
Tssr52868 | 5 | 11 | - | TSS region | transcription start site region 52868 | |
Tssr52869 | 5 | 19 | - | TSS region | transcription start site region 52869 | |
Tssr52870 | 5 | 7 | - | TSS region | transcription start site region 52870 | |
D5Mit209 | 5 | 324 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 209 | ||
Gstm2-ps1 | 5 | 656 | - | pseudogene | glutathione S-transferase mu 2 (muscle), pseudogene 1 | |
Tssr52871 | 5 | 4 | - | TSS region | transcription start site region 52871 | |
Tssr52872 | 5 | 2 | - | TSS region | transcription start site region 52872 | |
Tssr48346 | 5 | 6 | + | TSS region | transcription start site region 48346 | |
Gm43122 | 5 | 187818 | - | lincRNA gene | predicted gene 43122 | |
D5Mit405 | 5 | 123 | DNA segment | DNA Segment, Chr 5 Massachusetts Institute of Technology 405 | ||
Elmaz1 | 5 | -18866775 | QTL | elevated maze behavior 1 | ||
Tssr48347 | 5 | 8 | + | TSS region | transcription start site region 48347 | |
Gm29843 | 5 | 1590 | + | lncRNA gene | predicted gene, 29843 | |
Tssr48348 | 5 | 5 | + | TSS region | transcription start site region 48348 | |
Tssr48349 | 5 | 11 | + | TSS region | transcription start site region 48349 | |
Gm29926 | 5 | 2597 | + | lincRNA gene | predicted gene, 29926 | |
4930569F06Rik | 5 | 432 | + | unclassified non-coding RNA gene | RIKEN cDNA 4930569F06 gene | |
Gm42010 | 5 | 4339 | + | lncRNA gene | predicted gene, 42010 | |
Gm29972 | 5 | 16499 | - | lncRNA gene | predicted gene, 29972 | |
Cpgi16402 | 5 | 282 | CpG island | CpG island 16402 | ||
Gm30028 | 5 | 19943 | - | lncRNA gene | predicted gene, 30028 | |
Tssr52873 | 5 | 11 | - | TSS region | transcription start site region 52873 | |
Tssr52874 | 5 | 5 | - | TSS region | transcription start site region 52874 | |
Tssr52875 | 5 | 12 | - | TSS region | transcription start site region 52875 | |
Gm7478 | 5 | 580 | + | pseudogene | predicted gene 7478 | |
Gm42011 | 5 | 11565 | + | lncRNA gene | predicted gene, 42011 | |
Suds3 | 5 | 24315 | - | protein coding gene | suppressor of defective silencing 3 homolog (S. cerevisiae) | |
Cpgi16403 | 5 | 173 | CpG island | CpG island 16403 | ||
Cpgi16404 | 5 | 1308 | CpG island | CpG island 16404 | ||
9530046B11Rik | 5 | 3505 | + | antisense lncRNA gene | RIKEN cDNA 9530046B11 gene | |
Tssr52876 | 5 | 24 | - | TSS region | transcription start site region 52876 | |
Tssr52877 | 5 | 49 | - | TSS region | transcription start site region 52877 | |
Tssr52878 | 5 | 38 | - | TSS region | transcription start site region 52878 | |
Tssr52879 | 5 | 12 | - | TSS region | transcription start site region 52879 | |
Cpgi16405 | 5 | 1342 | CpG island | CpG island 16405 | ||
Tssr52880 | 5 | 21 | - | TSS region | transcription start site region 52880 | |
Taok3 | 5 | 154989 | + | protein coding gene | TAO kinase 3 | |
Tssr48350 | 5 | 60 | + | TSS region | transcription start site region 48350 | |
Tssr48351 | 5 | 11 | + | TSS region | transcription start site region 48351 | |
Tssr48352 | 5 | 62 | + | TSS region | transcription start site region 48352 | |
Gm43637 | 5 | 2925 | + | unclassified gene | predicted gene 43637 | |
Tssr48353 | 5 | 82 | + | TSS region | transcription start site region 48353 | |
Cpgi16406 | 5 | 177 | CpG island | CpG island 16406 | ||
Tssr48354 | 5 | 11 | + | TSS region | transcription start site region 48354 | |
Tssr48355 | 5 | 13 | + | TSS region | transcription start site region 48355 | |
Tssr48356 | 5 | 14 | + | TSS region | transcription start site region 48356 | |
Tssr48357 | 5 | 11 | + | TSS region | transcription start site region 48357 | |
Tssr48358 | 5 | 16 | + | TSS region | transcription start site region 48358 | |
Tssr48359 | 5 | 20 | + | TSS region | transcription start site region 48359 | |
Tssr48360 | 5 | 10 | + | TSS region | transcription start site region 48360 | |
Tssr48361 | 5 | 38 | + | TSS region | transcription start site region 48361 | |
Tssr48362 | 5 | 5 | + | TSS region | transcription start site region 48362 | |
Tssr48363 | 5 | 26 | + | TSS region | transcription start site region 48363 | |
n-R5s174 | 5 | 120 | + | rRNA gene | nuclear encoded rRNA 5S 174 | |
Tssr48364 | 5 | 27 | + | TSS region | transcription start site region 48364 | |
Tssr48365 | 5 | 30 | + | TSS region | transcription start site region 48365 | |
Tssr48366 | 5 | 15 | + | TSS region | transcription start site region 48366 | |
Tssr48367 | 5 | 19 | + | TSS region | transcription start site region 48367 | |
Tssr48368 | 5 | 5 | + | TSS region | transcription start site region 48368 | |
Cpgi16407 | 5 | 542 | CpG island | CpG island 16407 | ||
Tssr48369 | 5 | 18 | + | TSS region | transcription start site region 48369 | |
Tssr48370 | 5 | 22 | + | TSS region | transcription start site region 48370 | |
Cpgi16408 | 5 | 181 | CpG island | CpG island 16408 | ||
Tssr48371 | 5 | 13 | + | TSS region | transcription start site region 48371 | |
Tssr48372 | 5 | 4 | + | TSS region | transcription start site region 48372 | |
Tssr48373 | 5 | 28 | + | TSS region | transcription start site region 48373 | |
Tssr48374 | 5 | 6 | + | TSS region | transcription start site region 48374 | |
Pebp1 | 5 | 4913 | - | protein coding gene | phosphatidylethanolamine binding protein 1 | |
Cpgi16409 | 5 | 999 | CpG island | CpG island 16409 | ||
Tssr52881 | 5 | 34 | - | TSS region | transcription start site region 52881 | |
Tssr48375 | 5 | 7 | + | TSS region | transcription start site region 48375 | |
Gm3786 | 5 | 377 | - | pseudogene | predicted gene 3786 | |
Gm42546 | 5 | 2591 | + | unclassified gene | predicted gene 42546 | |
Tssr52882 | 5 | 16 | - | TSS region | transcription start site region 52882 | |
BC051077 | 5 | 3127 | - | lincRNA gene | cDNA sequence BC051077 | |
Gm10399 | 5 | 747 | - | antisense lncRNA gene | predicted gene 10399 | |
Tssr48376 | 5 | 21 | + | TSS region | transcription start site region 48376 | |
Cpgi16410 | 5 | 1275 | CpG island | CpG island 16410 | ||
Tssr48377 | 5 | 47 | + | TSS region | transcription start site region 48377 | |
Vsig10 | 5 | 35922 | + | protein coding gene | V-set and immunoglobulin domain containing 10 | |
Tssr48378 | 5 | 26 | + | TSS region | transcription start site region 48378 | |
Tssr48379 | 5 | 34 | + | TSS region | transcription start site region 48379 | |
Tssr48380 | 5 | 11 | + | TSS region | transcription start site region 48380 | |
Cpgi16411 | 5 | 377 | CpG island | CpG island 16411 | ||
Gm15727 | 5 | 436 | - | pseudogene | predicted gene 15727 | |
Cpgi16412 | 5 | 377 | CpG island | CpG island 16412 | ||
Gm42012 | 5 | 1666 | - | lncRNA gene | predicted gene, 42012 | |
Tssr48381 | 5 | 11 | + | TSS region | transcription start site region 48381 | |
Cpgi16413 | 5 | 1424 | CpG island | CpG island 16413 | ||
Tssr48382 | 5 | 33 | + | TSS region | transcription start site region 48382 | |
Tssr48383 | 5 | 13 | + | TSS region | transcription start site region 48383 | |
Tssr48384 | 5 | 81 | + | TSS region | transcription start site region 48384 | |
Wsb2 | 5 | 21284 | + | protein coding gene | WD repeat and SOCS box-containing 2 | |
Tssr48385 | 5 | 14 | + | TSS region | transcription start site region 48385 | |
Tssr48386 | 5 | 39 | + | TSS region | transcription start site region 48386 | |
Rfc5 | 5 | 9878 | - | protein coding gene | replication factor C (activator 1) 5 | |
Cpgi16414 | 5 | 866 | CpG island | CpG island 16414 | ||
Tssr52883 | 5 | 54 | - | TSS region | transcription start site region 52883 | |
Gm15728 | 5 | 2480 | + | lincRNA gene | predicted gene 15728 | |
Tssr52884 | 5 | 22 | - | TSS region | transcription start site region 52884 | |
Tssr48387 | 5 | 66 | + | TSS region | transcription start site region 48387 | |
Tssr48388 | 5 | 18 | + | TSS region | transcription start site region 48388 | |
Tssr52885 | 5 | 8 | - | TSS region | transcription start site region 52885 | |
Tssr52886 | 5 | 10 | - | TSS region | transcription start site region 52886 | |
Cpgi16415 | 5 | 1046 | CpG island | CpG island 16415 | ||
Tssr48389 | 5 | 19 | + | TSS region | transcription start site region 48389 | |
Tssr48390 | 5 | 12 | + | TSS region | transcription start site region 48390 | |
Tssr48391 | 5 | 34 | + | TSS region | transcription start site region 48391 | |
Ksr2 | 5 | 361003 | + | protein coding gene | kinase suppressor of ras 2 | |
Tssr1612 | 5 | 79 | + | TSS region | transcription start site region 1612 | |
Tssr48392 | 5 | 16 | + | TSS region | transcription start site region 48392 | |
Tssr48393 | 5 | 21 | + | TSS region | transcription start site region 48393 | |
Gm42013 | 5 | 3753 | - | lncRNA gene | predicted gene, 42013 | |
Tssr52887 | 5 | 24 | - | TSS region | transcription start site region 52887 | |
Cpgi16416 | 5 | 457 | CpG island | CpG island 16416 | ||
Cpgi16417 | 5 | 371 | CpG island | CpG island 16417 | ||
Tssr48394 | 5 | 7 | + | TSS region | transcription start site region 48394 | |
Tssr48395 | 5 | 12 | + | TSS region | transcription start site region 48395 | |
Tssr48396 | 5 | 7 | + | TSS region | transcription start site region 48396 | |
Gm42550 | 5 | 959 | + | unclassified gene | predicted gene 42550 | |
Smmq1 | 5 | 0 | QTL | soleus muscle mass QTL 1 | ||
Tammq2 | 5 | 0 | QTL | tibialis anterior muscle mass QTL 2 | ||
Cpgi16418 | 5 | 265 | CpG island | CpG island 16418 | ||
Tssr48397 | 5 | 16 | + | TSS region | transcription start site region 48397 | |
Tssr48398 | 5 | 2 | + | TSS region | transcription start site region 48398 | |
Tssr48399 | 5 | 58 | + | TSS region | transcription start site region 48399 | |
Nos1 | 5 | 177808 | + | protein coding gene | nitric oxide synthase 1, neuronal | |
Cpgi16419 | 5 | 1208 | CpG island | CpG island 16419 | ||
Tssr48400 | 5 | 18 | + | TSS region | transcription start site region 48400 | |
Tssr48401 | 5 | 41 | + | TSS region | transcription start site region 48401 | |
Tssr48402 | 5 | 9 | + | TSS region | transcription start site region 48402 | |
Tssr48403 | 5 | 54 | + | TSS region | transcription start site region 48403 | |
Gm30360 | 5 | 22129 | - | lncRNA gene | predicted gene, 30360 | |
Gm37028 | 5 | 106 | + | unclassified gene | predicted gene, 37028 | |
D5Mit188 | 5 | 147 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 188 | ||
Tssr52888 | 5 | 2 | - | TSS region | transcription start site region 52888 | |
Tssr52889 | 5 | 5 | - | TSS region | transcription start site region 52889 | |
Tssr48404 | 5 | 6 | + | TSS region | transcription start site region 48404 | |
D5Mit210a | 5 | 278 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 210a | ||
D5Mit210b | 5 | 207 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 210b | ||
D5Mit319 | 5 | 122 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 319 | ||
Gm26995 | 5 | 1465 | - | antisense lncRNA gene | predicted gene, 26995 | |
Tssr48405 | 5 | 24 | + | TSS region | transcription start site region 48405 | |
Cpgi16420 | 5 | 1901 | CpG island | CpG island 16420 | ||
Gm25343 | 5 | 106 | - | snRNA gene | predicted gene, 25343 | |
Fbxo21 | 5 | 33471 | + | protein coding gene | F-box protein 21 | |
Tssr48406 | 5 | 11 | + | TSS region | transcription start site region 48406 | |
Tssr48407 | 5 | 42 | + | TSS region | transcription start site region 48407 | |
Tssr1613 | 5 | 2 | + | TSS region | transcription start site region 1613 | |
D5Abb2e | 5 | 152 | DNA segment | DNA segment, Chr 5, Abbott 2 expressed | ||
Tssr48408 | 5 | 8 | + | TSS region | transcription start site region 48408 | |
Cpgi16421 | 5 | 370 | CpG island | CpG island 16421 | ||
Gm42545 | 5 | 921 | - | unclassified gene | predicted gene 42545 | |
Cpgi16422 | 5 | 2393 | CpG island | CpG island 16422 | ||
Tesc | 5 | 34130 | + | protein coding gene | tescalcin | |
Tssr48409 | 5 | 7 | + | TSS region | transcription start site region 48409 | |
Tssr48410 | 5 | 17 | + | TSS region | transcription start site region 48410 | |
Tssr48411 | 5 | 9 | + | TSS region | transcription start site region 48411 | |
Tssr48412 | 5 | 5 | + | TSS region | transcription start site region 48412 | |
Tssr48413 | 5 | 28 | + | TSS region | transcription start site region 48413 | |
Tssr48414 | 5 | 14 | + | TSS region | transcription start site region 48414 | |
Tssr48415 | 5 | 8 | + | TSS region | transcription start site region 48415 | |
Cpgi16423 | 5 | 398 | CpG island | CpG island 16423 | ||
Tssr52890 | 5 | 4 | - | TSS region | transcription start site region 52890 | |
Fbxw8 | 5 | 90477 | - | protein coding gene | F-box and WD-40 domain protein 8 | |
Gm9754 | 5 | 4350 | + | antisense lncRNA gene | predicted gene 9754 | |
Tssr52891 | 5 | 9 | - | TSS region | transcription start site region 52891 | |
Gm30466 | 5 | 3190 | + | lncRNA gene | predicted gene, 30466 |