Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:116212360-116418275

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ccdc60	5	116125581 to 116289004	163423	-	protein coding gene	coiled-coil domain containing 60
Tssr48343	5	116230448 to 116230449	1	+	TSS region	transcription start site region 48343
Gm36502	5	116232070 to 116238073	6003	+	lncRNA gene	predicted gene, 36502
Gm14507	5	116243706 to 116254953	11247	+	antisense lncRNA gene	predicted gene 14507
Gm13837	5	116257661 to 116258644	983	+	antisense lncRNA gene	predicted gene 13837
Tssr52846	5	116288944 to 116288977	33	-	TSS region	transcription start site region 52846
Tssr52847	5	116288978 to 116288999	21	-	TSS region	transcription start site region 52847
Tssr52848	5	116289000 to 116289009	9	-	TSS region	transcription start site region 52848
Gm13839	5	116301300 to 116303514	2214	+	lincRNA gene	predicted gene 13839
Gm13838	5	116305682 to 116309360	3678	-	lincRNA gene	predicted gene 13838
B230112J18Rik	5	116312360 to 116318275	5915	+	lincRNA gene	RIKEN cDNA B230112J18 gene
Cpgi16393	5	116350842 to 116351020	178		CpG island	CpG island 16393
4933424N20Rik	5	116380173 to 116381635	1462	-	unclassified gene	RIKEN cDNA 4933424N20 gene
Cpgi16394	5	116381279 to 116381438	159		CpG island	CpG island 16394
Tssr52849	5	116381599 to 116381604	5	-	TSS region	transcription start site region 52849
Tssr52850	5	116381620 to 116381638	18	-	TSS region	transcription start site region 52850
Tssr52851	5	116381641 to 116381644	3	-	TSS region	transcription start site region 52851
Tssr52852	5	116381648 to 116381653	5	-	TSS region	transcription start site region 52852
Tssr52853	5	116382703 to 116382707	4	-	TSS region	transcription start site region 52853
4930562A09Rik	5	116390678 to 116392800	2122	-	lincRNA gene	RIKEN cDNA 4930562A09 gene
Tssr52854	5	116392743 to 116392750	7	-	TSS region	transcription start site region 52854
Tssr52855	5	116392766 to 116392773	7	-	TSS region	transcription start site region 52855
Tssr48344	5	116406790 to 116406801	11	+	TSS region	transcription start site region 48344
Hspb8	5	116408491 to 116422864	14373	-	protein coding gene	heat shock protein 8
Tssr52856	5	116408840 to 116408865	25	-	TSS region	transcription start site region 52856
Gm36841	5	116412423 to 116418761	6338	+	lncRNA gene	predicted gene, 36841