Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115971777-116041781

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cit 5 115845224 to 116008586 163362 + protein coding gene citron
Tssr48336 5 115974854 to 115974856 2 + TSS region transcription start site region 48336
Tssr48337 5 115989815 to 115989820 5 + TSS region transcription start site region 48337
Cpgi16389 5 115994225 to 115994441 216 CpG island CpG island 16389
Tssr48338 5 116006777 to 116006781 4 + TSS region transcription start site region 48338
Tssr48339 5 116006831 to 116006835 4 + TSS region transcription start site region 48339
Gm14508 5 116009316 to 116016105 6789 + antisense lncRNA gene predicted gene 14508
Tssr48340 5 116009323 to 116009330 7 + TSS region transcription start site region 48340
Prkab1 5 116013586 to 116024503 10917 - protein coding gene protein kinase, AMP-activated, beta 1 non-catalytic subunit
Tssr52830 5 116021684 to 116021696 12 - TSS region transcription start site region 52830
Tssr52831 5 116021703 to 116021714 11 - TSS region transcription start site region 52831
Tssr52832 5 116021732 to 116021745 13 - TSS region transcription start site region 52832
Tssr52833 5 116021769 to 116021779 10 - TSS region transcription start site region 52833
Cpgi16390 5 116023860 to 116024885 1025 CpG island CpG island 16390
Tssr52834 5 116024229 to 116024279 50 - TSS region transcription start site region 52834
Tssr52835 5 116024329 to 116024340 11 - TSS region transcription start site region 52835
Tssr52836 5 116024357 to 116024370 13 - TSS region transcription start site region 52836
Tssr52837 5 116024378 to 116024438 60 - TSS region transcription start site region 52837
Tssr52838 5 116024441 to 116024450 9 - TSS region transcription start site region 52838
Tssr52839 5 116024452 to 116024468 16 - TSS region transcription start site region 52839
Tssr52840 5 116024475 to 116024490 15 - TSS region transcription start site region 52840
Gm13842 5 116026411 to 116029230 2819 - lincRNA gene predicted gene 13842
Gm17420 5 116032146 to 116032313 167 - pseudogene predicted gene, 17420
Tmem233 5 116040532 to 116083246 42714 - protein coding gene transmembrane protein 233