Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115499684-115539746

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr48299	5	115499748 to 115499751	3	+	TSS region	transcription start site region 48299
Tssr52818	5	115500462 to 115500495	33	-	TSS region	transcription start site region 52818
Tssr48300	5	115500642 to 115500649	7	+	TSS region	transcription start site region 48300
Tssr1611	5	115500667 to 115500676	9	+	TSS region	transcription start site region 1611
Cpgi16377	5	115506365 to 115507438	1073		CpG island	CpG island 16377
Tssr48301	5	115506668 to 115506753	85	+	TSS region	transcription start site region 48301
Pxn	5	115506676 to 115555987	49311	+	protein coding gene	paxillin
Gm13840	5	115515263 to 115515947	684	+	sense intronic lncRNA gene	predicted gene 13840
Cpgi16378	5	115516178 to 115516500	322		CpG island	CpG island 16378
Tssr48302	5	115519659 to 115519679	20	+	TSS region	transcription start site region 48302
Tssr48303	5	115519684 to 115519746	62	+	TSS region	transcription start site region 48303
Cpgi16379	5	115520351 to 115520578	227		CpG island	CpG island 16379
Tssr52819	5	115520641 to 115520646	5	-	TSS region	transcription start site region 52819
Tssr52820	5	115535773 to 115535794	21	-	TSS region	transcription start site region 52820