Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115474644-115484651

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pla2g1b	5	115466262 to 115474722	8460	+	protein coding gene	phospholipase A2, group IB, pancreas
Tssr52804	5	115474641 to 115474670	29	-	TSS region	transcription start site region 52804
Tssr48288	5	115474648 to 115474662	14	+	TSS region	transcription start site region 48288
Tssr48289	5	115474673 to 115474682	9	+	TSS region	transcription start site region 48289
Tssr52805	5	115474710 to 115474717	7	-	TSS region	transcription start site region 52805
Tssr48290	5	115476867 to 115476871	4	+	TSS region	transcription start site region 48290
Sirt4	5	115478010 to 115484725	6715	-	protein coding gene	sirtuin 4
Tssr52806	5	115479644 to 115479651	7	-	TSS region	transcription start site region 52806
Cpgi16372	5	115480099 to 115480527	428		CpG island	CpG island 16372
Cpgi16373	5	115482600 to 115483090	490		CpG island	CpG island 16373
Cpgi16374	5	115484222 to 115484561	339		CpG island	CpG island 16374
Tssr52807	5	115484351 to 115484387	36	-	TSS region	transcription start site region 52807
Gm42007	5	115484474 to 115486693	2219	+	lncRNA gene	predicted gene, 42007
Tssr48291	5	115484483 to 115484520	37	+	TSS region	transcription start site region 48291