Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115349078-115432863

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16368 5 115348222 to 115349468 1246 CpG island CpG island 16368
Gm42903 5 115349130 to 115353155 4025 + lincRNA gene predicted gene 42903
4930401G09Rik 5 115358700 to 115360123 1423 - lincRNA gene RIKEN cDNA 4930401G09 gene
Gm13832 5 115359078 to 115422863 63785 + lincRNA gene predicted gene 13832
Cpgi16369 5 115398263 to 115398928 665 CpG island CpG island 16369
Tssr48226 5 115404165 to 115404169 4 + TSS region transcription start site region 48226
Tssr48227 5 115404537 to 115404580 43 + TSS region transcription start site region 48227
A930005G22Rik 5 115420597 to 115422500 1903 - lncRNA gene RIKEN cDNA A930005G22 gene
Gm43231 5 115427218 to 115429475 2257 - unclassified gene predicted gene 43231
Cpgi16370 5 115429020 to 115430962 1942 CpG island CpG island 16370
Tssr52797 5 115429495 to 115429509 14 - TSS region transcription start site region 52797
Tssr48228 5 115429505 to 115429517 12 + TSS region transcription start site region 48228
Tssr48229 5 115429522 to 115429535 13 + TSS region transcription start site region 48229
Tssr48230 5 115429549 to 115429568 19 + TSS region transcription start site region 48230
Tssr48231 5 115429585 to 115429613 28 + TSS region transcription start site region 48231
Msi1 5 115429599 to 115455698 26099 + protein coding gene musashi RNA-binding protein 1
Tssr48232 5 115429622 to 115429683 61 + TSS region transcription start site region 48232
Tssr48233 5 115429696 to 115429707 11 + TSS region transcription start site region 48233
Tssr48234 5 115429720 to 115429734 14 + TSS region transcription start site region 48234
Tssr48235 5 115429759 to 115429770 11 + TSS region transcription start site region 48235
Tssr48236 5 115429944 to 115429992 48 + TSS region transcription start site region 48236
Tssr48237 5 115430317 to 115430336 19 + TSS region transcription start site region 48237
Tssr48238 5 115430580 to 115430629 49 + TSS region transcription start site region 48238
Tssr48239 5 115431359 to 115431382 23 + TSS region transcription start site region 48239
Tssr48240 5 115432007 to 115432018 11 + TSS region transcription start site region 48240
Tssr48241 5 115432020 to 115432040 20 + TSS region transcription start site region 48241