Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115312721-115352793

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13830 5 115301120 to 115319208 18088 + lincRNA gene predicted gene 13830
Tssr52779 5 115312898 to 115312899 1 - TSS region transcription start site region 52779
Tssr48213 5 115312994 to 115313025 31 + TSS region transcription start site region 48213
Tssr52780 5 115313760 to 115313772 12 - TSS region transcription start site region 52780
Cpgi16365 5 115319520 to 115319888 368 CpG island CpG island 16365
Cpgi16366 5 115326644 to 115328277 1633 CpG island CpG island 16366
Tssr52781 5 115326967 to 115326981 14 - TSS region transcription start site region 52781
Tssr52782 5 115326984 to 115327016 32 - TSS region transcription start site region 52782
Tssr48214 5 115327059 to 115327070 11 + TSS region transcription start site region 48214
Tssr48215 5 115327125 to 115327199 74 + TSS region transcription start site region 48215
Srsf9 5 115327177 to 115333080 5903 + protein coding gene serine/arginine-rich splicing factor 9
Tssr48216 5 115327201 to 115327267 66 + TSS region transcription start site region 48216
Tssr48217 5 115327274 to 115327283 9 + TSS region transcription start site region 48217
Tssr48218 5 115327644 to 115327677 33 + TSS region transcription start site region 48218
Tssr48219 5 115327723 to 115327734 11 + TSS region transcription start site region 48219
Tssr48220 5 115332721 to 115332793 72 + TSS region transcription start site region 48220
Tssr48221 5 115332858 to 115332872 14 + TSS region transcription start site region 48221
Gatc 5 115333242 to 115341161 7919 - protein coding gene glutamyl-tRNA(Gln) amidotransferase, subunit C
Tssr52783 5 115334029 to 115334064 35 - TSS region transcription start site region 52783
Tssr52784 5 115334068 to 115334095 27 - TSS region transcription start site region 52784
Tssr52785 5 115334098 to 115334169 71 - TSS region transcription start site region 52785
Tssr52786 5 115334224 to 115334240 16 - TSS region transcription start site region 52786
Tssr52787 5 115334269 to 115334280 11 - TSS region transcription start site region 52787
Tssr52788 5 115334479 to 115334498 19 - TSS region transcription start site region 52788
Tssr52789 5 115334516 to 115334531 15 - TSS region transcription start site region 52789
Cpgi16367 5 115340735 to 115341659 924 CpG island CpG island 16367
Tssr52790 5 115341112 to 115341139 27 - TSS region transcription start site region 52790
Tssr52791 5 115341142 to 115341191 49 - TSS region transcription start site region 52791
Tssr52792 5 115341195 to 115341211 16 - TSS region transcription start site region 52792
Tssr48222 5 115341225 to 115341270 45 + TSS region transcription start site region 48222
Triap1 5 115341247 to 115343552 2305 + protein coding gene TP53 regulated inhibitor of apoptosis 1
Tssr48223 5 115341288 to 115341297 9 + TSS region transcription start site region 48223
Tssr48224 5 115341315 to 115341324 9 + TSS region transcription start site region 48224
Cox6a1 5 115345654 to 115348955 3301 - protein coding gene cytochrome c oxidase subunit 6A1
Tssr48225 5 115345826 to 115345856 30 + TSS region transcription start site region 48225
Cpgi16368 5 115348222 to 115349468 1246 CpG island CpG island 16368
Tssr52793 5 115348596 to 115348628 32 - TSS region transcription start site region 52793
Tssr52794 5 115348652 to 115348663 11 - TSS region transcription start site region 52794
Tssr52795 5 115348712 to 115348738 26 - TSS region transcription start site region 52795
Tssr52796 5 115348953 to 115348959 6 - TSS region transcription start site region 52796
Gm42903 5 115349130 to 115353155 4025 + lincRNA gene predicted gene 42903