Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115148988-115258997

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mlec 5 115142981 to 115158176 15195 - protein coding gene malectin
Tssr52759 5 115152370 to 115152381 11 - TSS region transcription start site region 52759
Tssr52760 5 115155175 to 115155203 28 - TSS region transcription start site region 52760
Tssr52761 5 115156927 to 115156932 5 - TSS region transcription start site region 52761
Cpgi16353 5 115157126 to 115159013 1887 CpG island CpG island 16353
Tssr52762 5 115158135 to 115158159 24 - TSS region transcription start site region 52762
Tssr52763 5 115158169 to 115158180 11 - TSS region transcription start site region 52763
Tssr52764 5 115158336 to 115158347 11 - TSS region transcription start site region 52764
Tssr52765 5 115158365 to 115158390 25 - TSS region transcription start site region 52765
Gm35465 5 115159499 to 115165455 5956 + lncRNA gene predicted gene, 35465
Cabp1 5 115168691 to 115194381 25690 - protein coding gene calcium binding protein 1
Cpgi16354 5 115172695 to 115172970 275 CpG island CpG island 16354
Cpgi16355 5 115180688 to 115181157 469 CpG island CpG island 16355
Cpgi16356 5 115186896 to 115187067 171 CpG island CpG island 16356
Cpgi16357 5 115192404 to 115192617 213 CpG island CpG island 16357
Cpgi16358 5 115193246 to 115194904 1658 CpG island CpG island 16358
Tssr52766 5 115194182 to 115194200 18 - TSS region transcription start site region 52766
Tssr52767 5 115194214 to 115194225 11 - TSS region transcription start site region 52767
Tssr52768 5 115194245 to 115194257 12 - TSS region transcription start site region 52768
Tssr52769 5 115194258 to 115194274 16 - TSS region transcription start site region 52769
Tssr52770 5 115194283 to 115194327 44 - TSS region transcription start site region 52770
Gm35515 5 115194378 to 115205256 10878 + lncRNA gene predicted gene, 35515
Gm13828 5 115198343 to 115198705 362 + pseudogene predicted gene 13828
Tssr48206 5 115203988 to 115203997 9 + TSS region transcription start site region 48206
Cpgi16359 5 115204707 to 115205077 370 CpG island CpG island 16359
Cpgi16360 5 115235175 to 115236050 875 CpG island CpG island 16360
Tssr48207 5 115235496 to 115235511 15 + TSS region transcription start site region 48207
Tssr48208 5 115235522 to 115235533 11 + TSS region transcription start site region 48208
Pop5 5 115235589 to 115240972 5383 + protein coding gene processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
Cpgi16361 5 115237585 to 115238590 1005 CpG island CpG island 16361
Tssr48209 5 115238008 to 115238083 75 + TSS region transcription start site region 48209
Rnf10 5 115241770 to 115272895 31125 - protein coding gene ring finger protein 10