MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:115080299-115149346

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sppl3	5	115011524 to 115098790	87266	+	protein coding gene	signal peptide peptidase 3
Tssr48204	5	115082260 to 115082278	18	+	TSS region	transcription start site region 48204
Gm10401	5	115097689 to 115098295	606	-	unclassified gene	predicted gene 10401
Rpl37rt	5	115102923 to 115110268	7345	-	protein coding gene	ribosomal protein L37, retrotransposed
Tssr52752	5	115103540 to 115103560	20	-	TSS region	transcription start site region 52752
Acads	5	115110299 to 115119346	9047	-	protein coding gene	acyl-Coenzyme A dehydrogenase, short chain
Cpgi16350	5	115118976 to 115119504	528		CpG island	CpG island 16350
Tssr52753	5	115119277 to 115119345	68	-	TSS region	transcription start site region 52753
Unc119b	5	115122566 to 115134975	12409	-	protein coding gene	unc-119 lipid binding chaperone B
Cpgi16351	5	115125194 to 115125501	307		CpG island	CpG island 16351
Tssr52754	5	115127517 to 115127530	13	-	TSS region	transcription start site region 52754
Cpgi16352	5	115134237 to 115135091	854		CpG island	CpG island 16352
Tssr52755	5	115134907 to 115134968	61	-	TSS region	transcription start site region 52755
Mlec	5	115142981 to 115158176	15195	-	protein coding gene	malectin
Tssr48205	5	115147702 to 115147723	21	+	TSS region	transcription start site region 48205
Tssr52756	5	115147841 to 115147887	46	-	TSS region	transcription start site region 52756
Tssr52757	5	115148006 to 115148039	33	-	TSS region	transcription start site region 52757
Tssr52758	5	115148055 to 115148074	19	-	TSS region	transcription start site region 52758