Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:115001524-115108790

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16348	5	115004291 to 115004701	410		CpG island	CpG island 16348
Cpgi16349	5	115010619 to 115012501	1882		CpG island	CpG island 16349
Tssr48199	5	115011111 to 115011208	97	+	TSS region	transcription start site region 48199
Tssr48200	5	115011322 to 115011335	13	+	TSS region	transcription start site region 48200
Tssr48201	5	115011347 to 115011403	56	+	TSS region	transcription start site region 48201
Sppl3	5	115011524 to 115098790	87266	+	protein coding gene	signal peptide peptidase 3
Tssr48202	5	115025528 to 115025533	5	+	TSS region	transcription start site region 48202
C730045M19Rik	5	115039770 to 115041084	1314	+	unclassified gene	RIKEN cDNA C730045M19 gene
Tssr48203	5	115053461 to 115053468	7	+	TSS region	transcription start site region 48203
Gm13827	5	115053469 to 115053840	371	-	pseudogene	predicted gene 13827
Tssr48204	5	115082260 to 115082278	18	+	TSS region	transcription start site region 48204
Gm10401	5	115097689 to 115098295	606	-	unclassified gene	predicted gene 10401
Rpl37rt	5	115102923 to 115110268	7345	-	protein coding gene	ribosomal protein L37, retrotransposed
Tssr52752	5	115103540 to 115103560	20	-	TSS region	transcription start site region 52752