Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:114938169-114988481

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Diht 5 104350872 to 114963481 10612609 QTL dopamine-induced hypothermia
Cpgi16342 5 114942057 to 114942690 633 CpG island CpG island 16342
2210016L21Rik 5 114942163 to 114948540 6377 + protein coding gene RIKEN cDNA 2210016L21 gene
Tssr48192 5 114942176 to 114942212 36 + TSS region transcription start site region 48192
Tssr48193 5 114942216 to 114942223 7 + TSS region transcription start site region 48193
Hnf1a 5 114948980 to 114971062 22082 - protein coding gene HNF1 homeobox A
Tssr52745 5 114950822 to 114950853 31 - TSS region transcription start site region 52745
Cpgi16343 5 114952469 to 114952711 242 CpG island CpG island 16343
Tssr52746 5 114952718 to 114952721 3 - TSS region transcription start site region 52746
Tssr52747 5 114952750 to 114952763 13 - TSS region transcription start site region 52747
Cpgi16344 5 114955315 to 114955506 191 CpG island CpG island 16344
D5Mit158 5 114963169 to 114963481 312 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 158
Tssr48194 5 114968759 to 114968773 14 + TSS region transcription start site region 48194
Hnf1aos1 5 114968784 to 114998042 29258 + antisense lncRNA gene HNF1 homeobox A, opposite strand 1
Tssr48195 5 114968789 to 114968808 19 + TSS region transcription start site region 48195
Hnf1aos2 5 114968823 to 114971400 2577 + antisense lncRNA gene HNF1 homeobox A, opposite strand 2
Tssr48196 5 114968828 to 114968835 7 + TSS region transcription start site region 48196
Tssr48197 5 114969870 to 114969885 15 + TSS region transcription start site region 48197
Cpgi16345 5 114970593 to 114970964 371 CpG island CpG island 16345
Tssr52748 5 114970873 to 114970887 14 - TSS region transcription start site region 52748
Tssr52749 5 114971056 to 114971079 23 - TSS region transcription start site region 52749
Tssr52750 5 114971117 to 114971128 11 - TSS region transcription start site region 52750
Tssr52751 5 114973316 to 114973335 19 - TSS region transcription start site region 52751
1810017P11Rik 5 114975456 to 114976013 557 + unclassified gene RIKEN cDNA 1810017P11 gene
Cpgi16346 5 114979250 to 114979420 170 CpG island CpG island 16346