Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:114050426-114260433

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Svop 5 114026913 to 114091423 64510 - protein coding gene SV2 related protein
Gm16108 5 114065242 to 114089466 24224 + lncRNA gene predicted gene 16108
Tssr48052 5 114065439 to 114065449 10 + TSS region transcription start site region 48052
Tssr48053 5 114065457 to 114065476 19 + TSS region transcription start site region 48053
Cpgi16307 5 114091066 to 114091515 449 CpG island CpG island 16307
Tssr52689 5 114091190 to 114091223 33 - TSS region transcription start site region 52689
Tssr52690 5 114091265 to 114091287 22 - TSS region transcription start site region 52690
Tssr52691 5 114091298 to 114091324 26 - TSS region transcription start site region 52691
Tssr52692 5 114091331 to 114091346 15 - TSS region transcription start site region 52692
Tssr52693 5 114091358 to 114091404 46 - TSS region transcription start site region 52693
Cpgi16308 5 114099834 to 114101221 1387 CpG island CpG island 16308
Tssr48054 5 114100308 to 114100369 61 + TSS region transcription start site region 48054
Usp30 5 114100328 to 114123510 23182 + protein coding gene ubiquitin specific peptidase 30
Tssr48055 5 114103339 to 114103370 31 + TSS region transcription start site region 48055
Gm17833 5 114109007 to 114110000 993 + pseudogene predicted gene, 17833
Gm42913 5 114115829 to 114117681 1852 + unclassified gene predicted gene 42913
Alkbh2 5 114123926 to 114128218 4292 - protein coding gene alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase
Cpgi16309 5 114127345 to 114128398 1053 CpG island CpG island 16309
Tssr52694 5 114128171 to 114128219 48 - TSS region transcription start site region 52694
Cpgi16310 5 114130192 to 114131854 1662 CpG island CpG island 16310
Tssr48056 5 114130364 to 114130376 12 + TSS region transcription start site region 48056
Ung 5 114130386 to 114139323 8937 + protein coding gene uracil DNA glycosylase
Tssr48057 5 114130388 to 114130444 56 + TSS region transcription start site region 48057
Tssr52695 5 114130705 to 114130726 21 - TSS region transcription start site region 52695
Tssr48058 5 114131157 to 114131178 21 + TSS region transcription start site region 48058
Tssr48059 5 114131184 to 114131220 36 + TSS region transcription start site region 48059
Tssr52696 5 114131586 to 114131597 11 - TSS region transcription start site region 52696
Tssr48060 5 114132210 to 114132229 19 + TSS region transcription start site region 48060
Tssr48061 5 114143433 to 114143441 8 + TSS region transcription start site region 48061
Tssr48062 5 114143470 to 114143482 12 + TSS region transcription start site region 48062
Tssr48063 5 114146293 to 114146317 24 + TSS region transcription start site region 48063
Tssr48064 5 114146324 to 114146343 19 + TSS region transcription start site region 48064
Tssr48065 5 114146440 to 114146449 9 + TSS region transcription start site region 48065
Tssr48066 5 114146501 to 114146514 13 + TSS region transcription start site region 48066
Tssr48067 5 114146525 to 114146550 25 + TSS region transcription start site region 48067
Acacb 5 114146535 to 114250761 104226 + protein coding gene acetyl-Coenzyme A carboxylase beta
Tssr48068 5 114146566 to 114146610 44 + TSS region transcription start site region 48068
Tssr48069 5 114146675 to 114146715 40 + TSS region transcription start site region 48069
Tssr48070 5 114146717 to 114146735 18 + TSS region transcription start site region 48070
Tssr48071 5 114155426 to 114155433 7 + TSS region transcription start site region 48071
Tssr48072 5 114155453 to 114155467 14 + TSS region transcription start site region 48072
Tssr48073 5 114155471 to 114155515 44 + TSS region transcription start site region 48073
Cpgi16311 5 114175692 to 114176415 723 CpG island CpG island 16311
Tssr48074 5 114175889 to 114175938 49 + TSS region transcription start site region 48074
Tssr48075 5 114212044 to 114212049 5 + TSS region transcription start site region 48075
Gm13784 5 114237176 to 114237925 749 - pseudogene predicted gene 13784
Tssr48076 5 114248260 to 114248288 28 + TSS region transcription start site region 48076
Foxn4 5 114254164 to 114273807 19643 - protein coding gene forkhead box N4