Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:113832439-113918706

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
repro14	5	108614643 to 113883925	5269282		heritable phenotypic marker	reproductive mutant 14, JAX Reproductive Mutagenesis Program
Selplg	5	113818536 to 113832644	14108	-	protein coding gene	selectin, platelet (p-selectin) ligand
Tssr52665	5	113832474 to 113832484	10	-	TSS region	transcription start site region 52665
Tssr52666	5	113832496 to 113832512	16	-	TSS region	transcription start site region 52666
Tssr52667	5	113832530 to 113832545	15	-	TSS region	transcription start site region 52667
Tssr52668	5	113832603 to 113832663	60	-	TSS region	transcription start site region 52668
Tssr52669	5	113832716 to 113832739	23	-	TSS region	transcription start site region 52669
Cpgi16303	5	113837101 to 113837284	183		CpG island	CpG island 16303
Tssr48038	5	113842144 to 113842153	9	+	TSS region	transcription start site region 48038
Coro1c	5	113842439 to 113908706	66267	-	protein coding gene	coronin, actin binding protein 1C
Gm17122	5	113842601 to 113843116	515	+	antisense lncRNA gene	predicted gene 17122
Tssr52670	5	113843065 to 113843075	10	-	TSS region	transcription start site region 52670
Tssr48039	5	113843166 to 113843175	9	+	TSS region	transcription start site region 48039
Tssr52671	5	113843945 to 113843975	30	-	TSS region	transcription start site region 52671
Tssr52672	5	113844018 to 113844039	21	-	TSS region	transcription start site region 52672
Tssr52673	5	113844066 to 113844088	22	-	TSS region	transcription start site region 52673
Tssr52674	5	113844256 to 113844274	18	-	TSS region	transcription start site region 52674
Gm43335	5	113860161 to 113863436	3275	+	unclassified gene	predicted gene 43335
Tssr48040	5	113873145 to 113873152	7	+	TSS region	transcription start site region 48040
Gm42005	5	113875130 to 113877529	2399	+	lncRNA gene	predicted gene, 42005
Lprq4	5	113883692 to 129555542	15671850		QTL	lipoprotein QTL 4
Pcd8ts1	5	113883692 to 113883925	233		QTL	p-glycoprotein positive CD8 T cell subset 1
D5Mit25	5	113883692 to 113883925	233		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 25
Smdq1	5	113883692 to 113883925	233		QTL	segregation of mitochondrial DNA QTL 1
Tir10	5	113883925 to 97871790	-16012135		QTL	trypanosome infection response 10
Gm43336	5	113900395 to 113904898	4503	-	unclassified gene	predicted gene 43336
Tssr48041	5	113907210 to 113907216	6	+	TSS region	transcription start site region 48041
Cpgi16304	5	113907897 to 113909396	1499		CpG island	CpG island 16304
Tssr52675	5	113908665 to 113908674	9	-	TSS region	transcription start site region 52675
Tssr52676	5	113908685 to 113908720	35	-	TSS region	transcription start site region 52676