Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:113727123-113807326

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16298 5 113727348 to 113727514 166 CpG island CpG island 16298
Cpgi16299 5 113735278 to 113736481 1203 CpG island CpG island 16299
Ficd 5 113735803 to 113740600 4797 + protein coding gene FIC domain containing
Tssr48031 5 113736003 to 113736030 27 + TSS region transcription start site region 48031
Sart3 5 113742444 to 113772505 30061 - protein coding gene squamous cell carcinoma antigen recognized by T cells 3
Tssr52650 5 113745188 to 113745197 9 - TSS region transcription start site region 52650
Gm3511 5 113767123 to 113767326 203 + pseudogene predicted gene 3511
Cpgi16300 5 113770917 to 113773401 2484 CpG island CpG island 16300
Tssr52651 5 113771643 to 113771659 16 - TSS region transcription start site region 52651
Tssr52652 5 113772635 to 113772706 71 - TSS region transcription start site region 52652
Tssr48032 5 113772786 to 113772827 41 + TSS region transcription start site region 48032
Iscu 5 113772812 to 113778282 5470 + protein coding gene iron-sulfur cluster assembly enzyme
Tmem119 5 113793729 to 113800358 6629 - protein coding gene transmembrane protein 119
Cpgi16301 5 113795379 to 113795929 550 CpG island CpG island 16301
Tssr52653 5 113800356 to 113800412 56 - TSS region transcription start site region 52653
Gm42004 5 113800591 to 113814984 14393 + lncRNA gene predicted gene, 42004
Tssr52654 5 113805430 to 113805432 2 - TSS region transcription start site region 52654