Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:113646020-113748711

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cmklr1	5	113612354 to 113650426	38072	-	protein coding gene	chemokine-like receptor 1
Tssr52645	5	113650371 to 113650381	10	-	TSS region	transcription start site region 52645
Tssr52646	5	113650390 to 113650448	58	-	TSS region	transcription start site region 52646
Tssr52647	5	113650569 to 113650580	11	-	TSS region	transcription start site region 52647
Tssr52648	5	113654912 to 113654917	5	-	TSS region	transcription start site region 52648
1700069L16Rik	5	113692424 to 113724772	32348	-	protein coding gene	RIKEN cDNA 1700069L16 gene
Gm46919	5	113696020 to 113698711	2691	-	lncRNA gene	predicted gene, 46919
Tssr48030	5	113717377 to 113717414	37	+	TSS region	transcription start site region 48030
Cpgi16297	5	113724585 to 113724821	236		CpG island	CpG island 16297
Tssr52649	5	113724771 to 113724788	17	-	TSS region	transcription start site region 52649
Cpgi16298	5	113727348 to 113727514	166		CpG island	CpG island 16298
Cpgi16299	5	113735278 to 113736481	1203		CpG island	CpG island 16299
Ficd	5	113735803 to 113740600	4797	+	protein coding gene	FIC domain containing
Tssr48031	5	113736003 to 113736030	27	+	TSS region	transcription start site region 48031
Sart3	5	113742444 to 113772505	30061	-	protein coding gene	squamous cell carcinoma antigen recognized by T cells 3
Tssr52650	5	113745188 to 113745197	9	-	TSS region	transcription start site region 52650