MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:113585390-113715448

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Wscd2	5	113490333 to 113589725	99392	+	protein coding gene	WSC domain containing 2
Tssr52640	5	113586078 to 113586099	21	-	TSS region	transcription start site region 52640
Cpgi16295	5	113587737 to 113588096	359		CpG island	CpG island 16295
Tssr48029	5	113589130 to 113589146	16	+	TSS region	transcription start site region 48029
Tssr52641	5	113596435 to 113596468	33	-	TSS region	transcription start site region 52641
Gm42002	5	113603228 to 113610998	7770	+	lncRNA gene	predicted gene, 42002
Cmklr1	5	113612354 to 113650426	38072	-	protein coding gene	chemokine-like receptor 1
Tssr52642	5	113614334 to 113614359	25	-	TSS region	transcription start site region 52642
Tssr52643	5	113639201 to 113639205	4	-	TSS region	transcription start site region 52643
Cpgi16296	5	113643505 to 113643753	248		CpG island	CpG island 16296
Tssr52644	5	113644259 to 113644281	22	-	TSS region	transcription start site region 52644
Gm15736	5	113644963 to 113645682	719	+	antisense lncRNA gene	predicted gene 15736
Tssr52645	5	113650371 to 113650381	10	-	TSS region	transcription start site region 52645
Tssr52646	5	113650390 to 113650448	58	-	TSS region	transcription start site region 52646
Tssr52647	5	113650569 to 113650580	11	-	TSS region	transcription start site region 52647
Tssr52648	5	113654912 to 113654917	5	-	TSS region	transcription start site region 52648
1700069L16Rik	5	113692424 to 113724772	32348	-	protein coding gene	RIKEN cDNA 1700069L16 gene
Gm46919	5	113696020 to 113698711	2691	-	lncRNA gene	predicted gene, 46919