Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:112226221-112276237

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Miat 5 112213228 to 112228948 15720 - lincRNA gene myocardial infarction associated transcript (non-protein coding)
Gm26953 5 112215461 to 112233720 18259 + lincRNA gene predicted gene, 26953
Cpgi16254 5 112227351 to 112227883 532 CpG island CpG island 16254
Cpgi16255 5 112228093 to 112229254 1161 CpG island CpG island 16255
Gm27357 5 112228608 to 112228742 134 - unclassified non-coding RNA gene predicted gene, 27357
Tssr52546 5 112228633 to 112228680 47 - TSS region transcription start site region 52546
Tssr52547 5 112228769 to 112228810 41 - TSS region transcription start site region 52547
Tssr52548 5 112228900 to 112228926 26 - TSS region transcription start site region 52548
Tssr52549 5 112228934 to 112228975 41 - TSS region transcription start site region 52549
Tssr52550 5 112229067 to 112229087 20 - TSS region transcription start site region 52550
Cryba4 5 112246493 to 112252518 6025 - protein coding gene crystallin, beta A4
Tssr52551 5 112246536 to 112246554 18 - TSS region transcription start site region 52551
Tssr52552 5 112249324 to 112249340 16 - TSS region transcription start site region 52552
Tssr52553 5 112251137 to 112251177 40 - TSS region transcription start site region 52553
Tssr52554 5 112251186 to 112251205 19 - TSS region transcription start site region 52554
Tssr52555 5 112251208 to 112251219 11 - TSS region transcription start site region 52555
Tssr52556 5 112251221 to 112251237 16 - TSS region transcription start site region 52556
Tssr52557 5 112252450 to 112252463 13 - TSS region transcription start site region 52557
Tssr52558 5 112252513 to 112252525 12 - TSS region transcription start site region 52558
Tssr47954 5 112255813 to 112255827 14 + TSS region transcription start site region 47954
Crybb1 5 112255815 to 112269585 13770 + protein coding gene crystallin, beta B1
Tssr47955 5 112257463 to 112257474 11 + TSS region transcription start site region 47955
Tssr1592 5 112257480 to 112257490 10 + TSS region transcription start site region 1592
Tssr47956 5 112257569 to 112257582 13 + TSS region transcription start site region 47956
Tssr47957 5 112259306 to 112259317 11 + TSS region transcription start site region 47957
Tssr47958 5 112259322 to 112259337 15 + TSS region transcription start site region 47958
Tssr47959 5 112259481 to 112259499 18 + TSS region transcription start site region 47959
Tssr47960 5 112259625 to 112259659 34 + TSS region transcription start site region 47960
Tssr47961 5 112261585 to 112261596 11 + TSS region transcription start site region 47961
Tssr47962 5 112261616 to 112261636 20 + TSS region transcription start site region 47962
Tssr47963 5 112261642 to 112261653 11 + TSS region transcription start site region 47963
Tssr47964 5 112261673 to 112261681 8 + TSS region transcription start site region 47964
Tssr47965 5 112261682 to 112261690 8 + TSS region transcription start site region 47965
Tssr47966 5 112261709 to 112261721 12 + TSS region transcription start site region 47966
Tssr47967 5 112261724 to 112261735 11 + TSS region transcription start site region 47967
Tssr47968 5 112261741 to 112261746 5 + TSS region transcription start site region 47968
Tssr47969 5 112261791 to 112261800 9 + TSS region transcription start site region 47969
Tssr47970 5 112261802 to 112261853 51 + TSS region transcription start site region 47970
Tssr47971 5 112261882 to 112261893 11 + TSS region transcription start site region 47971
Tssr47972 5 112261898 to 112261907 9 + TSS region transcription start site region 47972
Tssr47973 5 112261943 to 112261974 31 + TSS region transcription start site region 47973
Tssr47974 5 112261982 to 112262023 41 + TSS region transcription start site region 47974
Tssr47975 5 112262027 to 112262046 19 + TSS region transcription start site region 47975
Tssr47976 5 112263515 to 112263526 11 + TSS region transcription start site region 47976
Tssr47977 5 112263560 to 112263575 15 + TSS region transcription start site region 47977
Tssr52559 5 112267353 to 112267362 9 - TSS region transcription start site region 52559
Tssr52560 5 112267388 to 112267401 13 - TSS region transcription start site region 52560
Tssr47978 5 112267518 to 112267525 7 + TSS region transcription start site region 47978
Tssr47979 5 112267544 to 112267557 13 + TSS region transcription start site region 47979
Cpgi16256 5 112269272 to 112269533 261 CpG island CpG island 16256
Tssr47980 5 112269310 to 112269318 8 + TSS region transcription start site region 47980
Tssr47981 5 112269457 to 112269464 7 + TSS region transcription start site region 47981
Tssr47982 5 112269474 to 112269482 8 + TSS region transcription start site region 47982
Tssr52561 5 112269485 to 112269517 32 - TSS region transcription start site region 52561
Tssr47983 5 112269488 to 112269496 8 + TSS region transcription start site region 47983
Tssr47984 5 112269497 to 112269506 9 + TSS region transcription start site region 47984
Tssr47985 5 112269508 to 112269545 37 + TSS region transcription start site region 47985
Tssr52562 5 112269529 to 112269551 22 - TSS region transcription start site region 52562
Gm46941 5 112270721 to 112271452 731 - lncRNA gene predicted gene, 46941
Cpgi16257 5 112271185 to 112271475 290 CpG island CpG island 16257
Tssr52563 5 112273765 to 112273788 23 - TSS region transcription start site region 52563
Cpgi16258 5 112275821 to 112277295 1474 CpG island CpG island 16258