Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:112207351-112247883

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
1700028D13Rik	5	112206763 to 112210002	3239	+	lincRNA gene	RIKEN cDNA 1700028D13 gene
Miat	5	112213228 to 112228948	15720	-	lincRNA gene	myocardial infarction associated transcript (non-protein coding)
Cpgi16252	5	112214474 to 112214686	212		CpG island	CpG island 16252
Gm26953	5	112215461 to 112233720	18259	+	lincRNA gene	predicted gene, 26953
Gm27998	5	112215507 to 112215867	360	-	unclassified non-coding RNA gene	predicted gene, 27998
Gm27882	5	112216740 to 112216813	73	-	unclassified non-coding RNA gene	predicted gene, 27882
Cpgi16253	5	112217044 to 112217200	156		CpG island	CpG island 16253
Gm27627	5	112217318 to 112217467	149	-	unclassified non-coding RNA gene	predicted gene, 27627
Cpgi16254	5	112227351 to 112227883	532		CpG island	CpG island 16254
Cpgi16255	5	112228093 to 112229254	1161		CpG island	CpG island 16255
Gm27357	5	112228608 to 112228742	134	-	unclassified non-coding RNA gene	predicted gene, 27357
Tssr52546	5	112228633 to 112228680	47	-	TSS region	transcription start site region 52546
Tssr52547	5	112228769 to 112228810	41	-	TSS region	transcription start site region 52547
Tssr52548	5	112228900 to 112228926	26	-	TSS region	transcription start site region 52548
Tssr52549	5	112228934 to 112228975	41	-	TSS region	transcription start site region 52549
Tssr52550	5	112229067 to 112229087	20	-	TSS region	transcription start site region 52550
Cryba4	5	112246493 to 112252518	6025	-	protein coding gene	crystallin, beta A4
Tssr52551	5	112246536 to 112246554	18	-	TSS region	transcription start site region 52551