Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:112086222-112226231

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30032 5 112104845 to 112120913 16068 - lncRNA gene predicted gene, 30032
Tssr52544 5 112120887 to 112120915 28 - TSS region transcription start site region 52544
Tssr52545 5 112121068 to 112121069 1 - TSS region transcription start site region 52545
Cpgi16251 5 112153653 to 112154303 650 CpG island CpG island 16251
Tssr47949 5 112156222 to 112156231 9 + TSS region transcription start site region 47949
Tssr47950 5 112156233 to 112156240 7 + TSS region transcription start site region 47950
1700016B01Rik 5 112156237 to 112165244 9007 + lincRNA gene RIKEN cDNA 1700016B01 gene
Tssr47951 5 112195496 to 112195499 3 + TSS region transcription start site region 47951
Tssr47952 5 112206758 to 112206781 23 + TSS region transcription start site region 47952
1700028D13Rik 5 112206763 to 112210002 3239 + lincRNA gene RIKEN cDNA 1700028D13 gene
Tssr47953 5 112206786 to 112206793 7 + TSS region transcription start site region 47953
Miat 5 112213228 to 112228948 15720 - lincRNA gene myocardial infarction associated transcript (non-protein coding)
Cpgi16252 5 112214474 to 112214686 212 CpG island CpG island 16252
Gm26953 5 112215461 to 112233720 18259 + lincRNA gene predicted gene, 26953
Gm27998 5 112215507 to 112215867 360 - unclassified non-coding RNA gene predicted gene, 27998
Gm27882 5 112216740 to 112216813 73 - unclassified non-coding RNA gene predicted gene, 27882
Cpgi16253 5 112217044 to 112217200 156 CpG island CpG island 16253
Gm27627 5 112217318 to 112217467 149 - unclassified non-coding RNA gene predicted gene, 27627