MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:11180212-11635204

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm32554	5	11165537 to 11181825	16288	-	lincRNA gene	predicted gene, 32554
Gm5861	5	11183072 to 11187810	4738	+	protein coding gene	predicted gene 5861
Gm4047	5	11190194 to 11222014	31820		lncRNA gene	predicted gene 4047
Gm29743	5	11192475 to 11193593	1118	+	pseudogene	predicted gene, 29743
Gm33093	5	11238536 to 11254753	16217	-	lincRNA gene	predicted gene, 33093
Gm8890	5	11256033 to 11260494	4461	+	protein coding gene	predicted gene 8890
Gm8891	5	11265590 to 11266421	831	+	pseudogene	predicted gene 8891
Gm32877	5	11320804 to 11340297	19493	-	lincRNA gene	predicted gene, 32877
Speer1	5	11341516 to 11346286	4770	+	protein coding gene	spermatogenesis associated glutamate (E)-rich protein 1
Gm8896	5	11351104 to 11352209	1105	+	pseudogene	predicted gene 8896
1700108N06Rik	5	11400212 to 11415204	14992	-	lincRNA gene	RIKEN cDNA 1700108N06 gene
Gm8897	5	11416418 to 11421235	4817	+	protein coding gene	predicted gene 8897
Gm29745	5	11426453 to 11427139	686	+	pseudogene	predicted gene, 29745
Gm43540	5	11460424 to 11464271	3847	+	pseudogene	predicted gene 43540
4930437M23Rik	5	11485335 to 11501452	16117	-	lincRNA gene	RIKEN cDNA 4930437M23 gene
Gm8906	5	11502685 to 11507417	4732	+	protein coding gene	predicted gene 8906
Gm21040	5	11512247 to 11513355	1108	+	pseudogene	predicted gene, 21040
Gm43640	5	11577108 to 11593779	16671	-	lincRNA gene	predicted gene 43640
Gm6460	5	11594956 to 11599480	4524	+	protein coding gene	predicted gene 6460
Gm8920	5	11604671 to 11605594	923	+	pseudogene	predicted gene 8920