MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:111174203-111404214

Filter by:

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ttc28	5	110879803 to 111289780	409977	+	protein coding gene	tetratricopeptide repeat domain 28
Tssr52538	5	111178658 to 111178670	12	-	TSS region	transcription start site region 52538
Gm43676	5	111197140 to 111197679	539	+	unclassified gene	predicted gene 43676
Cpgi16242	5	111201525 to 111201765	240		CpG island	CpG island 16242
Gm35628	5	111232466 to 111233239	773	-	lncRNA gene	predicted gene, 35628
Tssr52539	5	111234692 to 111234699	7	-	TSS region	transcription start site region 52539
Tssr47929	5	111235352 to 111235374	22	+	TSS region	transcription start site region 47929
Gm27602	5	111274984 to 111275094	110	-	unclassified non-coding RNA gene	predicted gene, 27602
Tssr47930	5	111287365 to 111287376	11	+	TSS region	transcription start site region 47930
Tssr47931	5	111289203 to 111289214	11	+	TSS region	transcription start site region 47931
Cpgi16243	5	111330273 to 111331338	1065		CpG island	CpG island 16243
Gm27680	5	111330473 to 111330632	159	-	unclassified non-coding RNA gene	predicted gene, 27680
Tssr47932	5	111330742 to 111330768	26	+	TSS region	transcription start site region 47932
Pitpnb	5	111330763 to 111388359	57596	+	protein coding gene	phosphatidylinositol transfer protein, beta
Gm36027	5	111357620 to 111363480	5860	+	lncRNA gene	predicted gene, 36027
Tssr1589	5	111380208 to 111380231	23	+	TSS region	transcription start site region 1589
Gm43118	5	111387515 to 111388289	774	-	antisense lncRNA gene	predicted gene 43118
Gm10405	5	111392059 to 111395732	3673		unclassified gene	predicted gene 10405