Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:111134692-111334699

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ttc28	5	110879803 to 111289780	409977	+	protein coding gene	tetratricopeptide repeat domain 28
Tssr47928	5	111139931 to 111139935	4	+	TSS region	transcription start site region 47928
Gm43677	5	111158311 to 111160688	2377	+	unclassified gene	predicted gene 43677
Tssr52538	5	111178658 to 111178670	12	-	TSS region	transcription start site region 52538
Gm43676	5	111197140 to 111197679	539	+	unclassified gene	predicted gene 43676
Cpgi16242	5	111201525 to 111201765	240		CpG island	CpG island 16242
Gm35628	5	111232466 to 111233239	773	-	lncRNA gene	predicted gene, 35628
Tssr52539	5	111234692 to 111234699	7	-	TSS region	transcription start site region 52539
Tssr47929	5	111235352 to 111235374	22	+	TSS region	transcription start site region 47929
Gm27602	5	111274984 to 111275094	110	-	unclassified non-coding RNA gene	predicted gene, 27602
Tssr47930	5	111287365 to 111287376	11	+	TSS region	transcription start site region 47930
Tssr47931	5	111289203 to 111289214	11	+	TSS region	transcription start site region 47931
Cpgi16243	5	111330273 to 111331338	1065		CpG island	CpG island 16243
Gm27680	5	111330473 to 111330632	159	-	unclassified non-coding RNA gene	predicted gene, 27680
Tssr47932	5	111330742 to 111330768	26	+	TSS region	transcription start site region 47932
Pitpnb	5	111330763 to 111388359	57596	+	protein coding gene	phosphatidylinositol transfer protein, beta