Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:111027140-111367679

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttc28 5 110879803 to 111289780 409977 + protein coding gene tetratricopeptide repeat domain 28
Gm42780 5 111028552 to 111029285 733 + unclassified gene predicted gene 42780
Cpgi16241 5 111058446 to 111058648 202 CpG island CpG island 16241
Tssr47925 5 111104808 to 111104811 3 + TSS region transcription start site region 47925
8430408J09Rik 5 111109401 to 111111122 1721 unclassified gene RIKEN cDNA 8430408J09 gene
Tssr47926 5 111116381 to 111116384 3 + TSS region transcription start site region 47926
Tssr47927 5 111124088 to 111124099 11 + TSS region transcription start site region 47927
Tssr47928 5 111139931 to 111139935 4 + TSS region transcription start site region 47928
Gm43677 5 111158311 to 111160688 2377 + unclassified gene predicted gene 43677
Tssr52538 5 111178658 to 111178670 12 - TSS region transcription start site region 52538
Gm43676 5 111197140 to 111197679 539 + unclassified gene predicted gene 43676
Cpgi16242 5 111201525 to 111201765 240 CpG island CpG island 16242
Gm35628 5 111232466 to 111233239 773 - lncRNA gene predicted gene, 35628
Tssr52539 5 111234692 to 111234699 7 - TSS region transcription start site region 52539
Tssr47929 5 111235352 to 111235374 22 + TSS region transcription start site region 47929
Gm27602 5 111274984 to 111275094 110 - unclassified non-coding RNA gene predicted gene, 27602
Tssr47930 5 111287365 to 111287376 11 + TSS region transcription start site region 47930
Tssr47931 5 111289203 to 111289214 11 + TSS region transcription start site region 47931
Cpgi16243 5 111330273 to 111331338 1065 CpG island CpG island 16243
Gm27680 5 111330473 to 111330632 159 - unclassified non-coding RNA gene predicted gene, 27680
Tssr47932 5 111330742 to 111330768 26 + TSS region transcription start site region 47932
Pitpnb 5 111330763 to 111388359 57596 + protein coding gene phosphatidylinositol transfer protein, beta
Gm36027 5 111357620 to 111363480 5860 + lncRNA gene predicted gene, 36027