MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:110856573-110956588

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chek2	5	110839979 to 110874145	34166	+	protein coding gene	checkpoint kinase 2
Tssr47912	5	110867886 to 110867914	28	+	TSS region	transcription start site region 47912
Tssr1588	5	110867930 to 110867938	8	+	TSS region	transcription start site region 1588
Gm42779	5	110876603 to 110877273	670	+	pseudogene	predicted gene 42779
Cpgi16239	5	110879388 to 110880472	1084		CpG island	CpG island 16239
Tssr47913	5	110879788 to 110879842	54	+	TSS region	transcription start site region 47913
Ttc28	5	110879803 to 111289780	409977	+	protein coding gene	tetratricopeptide repeat domain 28
Tssr47914	5	110879846 to 110879887	41	+	TSS region	transcription start site region 47914
Tssr47915	5	110879926 to 110879941	15	+	TSS region	transcription start site region 47915
Tssr47916	5	110895205 to 110895241	36	+	TSS region	transcription start site region 47916
Tssr47917	5	110895270 to 110895304	34	+	TSS region	transcription start site region 47917
Tssr47918	5	110898566 to 110898571	5	+	TSS region	transcription start site region 47918
Gm15989	5	110905244 to 110905741	497	+	pseudogene	predicted gene 15989
Tssr47919	5	110906397 to 110906406	9	+	TSS region	transcription start site region 47919
Tssr47920	5	110906477 to 110906491	14	+	TSS region	transcription start site region 47920
Tssr47921	5	110906573 to 110906588	15	+	TSS region	transcription start site region 47921
Gm35973	5	110930102 to 110943879	13777	+	lncRNA gene	predicted gene, 35973
Tssr47922	5	110956078 to 110956081	3	+	TSS region	transcription start site region 47922