Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:110171701-110231470

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chfr 5 110135842 to 110171972 36130 + protein coding gene checkpoint with forkhead and ring finger domains
Gm15787 5 110167508 to 110176504 8996 - lncRNA gene predicted gene 15787
Cpgi16223 5 110176423 to 110177409 986 CpG island CpG island 16223
Tssr52495 5 110176449 to 110176463 14 - TSS region transcription start site region 52495
Tssr52496 5 110176497 to 110176512 15 - TSS region transcription start site region 52496
Tssr47872 5 110176553 to 110176565 12 + TSS region transcription start site region 47872
Tssr47873 5 110176579 to 110176600 21 + TSS region transcription start site region 47873
Tssr47874 5 110176640 to 110176678 38 + TSS region transcription start site region 47874
Golga3 5 110176701 to 110226470 49769 + protein coding gene golgi autoantigen, golgin subfamily a, 3
Tssr47875 5 110176811 to 110176820 9 + TSS region transcription start site region 47875
Tssr47876 5 110176850 to 110176864 14 + TSS region transcription start site region 47876
Tssr47877 5 110176868 to 110176896 28 + TSS region transcription start site region 47877
Tssr47878 5 110176964 to 110176973 9 + TSS region transcription start site region 47878
Tssr47879 5 110181031 to 110181032 1 + TSS region transcription start site region 47879
Tssr47880 5 110204774 to 110204808 34 + TSS region transcription start site region 47880
Gm43138 5 110206580 to 110207287 707 + sense intronic lncRNA gene predicted gene 43138
5930411N13Rik 5 110227401 to 110230719 3318 - lncRNA gene RIKEN cDNA 5930411N13 gene
Cpgi16224 5 110230547 to 110231576 1029 CpG island CpG island 16224
Gm43137 5 110230608 to 110231201 593 - antisense lncRNA gene predicted gene 43137
Tssr52497 5 110230860 to 110230919 59 - TSS region transcription start site region 52497
Tssr47881 5 110230975 to 110231099 124 + TSS region transcription start site region 47881
Ankle2 5 110231004 to 110256651 25647 + protein coding gene ankyrin repeat and LEM domain containing 2
Tssr47882 5 110231117 to 110231133 16 + TSS region transcription start site region 47882
Tssr1583 5 110231140 to 110231165 25 + TSS region transcription start site region 1583