Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108821873-109284452

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18594 5 108821721 to 108823123 1402 + pseudogene predicted gene, 18594
Vmn2r9 5 108842947 to 108852510 9563 - protein coding gene vomeronasal 2, receptor 9
Gm10417 5 108864833 to 108868354 3521 + protein coding gene predicted gene 10417
Vmn2r-ps21 5 108873215 to 108892353 19138 - pseudogene vomeronasal 2, receptor, pseudogene 21
Cpgi16210 5 108903219 to 108903529 310 CpG island CpG island 16210
Gm42627 5 108903226 to 108903449 223 + pseudogene predicted gene 42627
Gm20629 5 108943914 to 108949415 5501 + antisense lncRNA gene predicted gene 20629
Gm18971 5 108971677 to 108972050 373 + pseudogene predicted gene, 18971
Gm18595 5 108972806 to 108975895 3089 + pseudogene predicted gene, 18595
Vmn2r10 5 108995539 to 109006436 10897 - protein coding gene vomeronasal 2, receptor 10
Tssr52466 5 109015679 to 109015710 31 - TSS region transcription start site region 52466
Gm5871 5 109016198 to 109016915 717 - pseudogene predicted gene 5871
Tssr52467 5 109016922 to 109016941 19 - TSS region transcription start site region 52467
Vmn2r11 5 109046873 to 109059452 12579 - protein coding gene vomeronasal 2, receptor 11
Tssr47856 5 109055618 to 109055629 11 + TSS region transcription start site region 47856
Tssr47857 5 109055643 to 109055653 10 + TSS region transcription start site region 47857
Tssr47858 5 109055715 to 109055720 5 + TSS region transcription start site region 47858
Vmn2r12 5 109085849 to 109097864 12015 - protein coding gene vomeronasal 2, receptor 12
Hypch 5 109090758 to 139133150 30042392 QTL hypercholesterolemia
D5Mit240 5 109090758 to 109090907 149 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 240
Vmn2r13 5 109156068 to 109192107 36039 - protein coding gene vomeronasal 2, receptor 13
Vmn2r14 5 109214956 to 109224622 9666 - protein coding gene vomeronasal 2, receptor 14
Gm8473 5 109236877 to 109238530 1653 + pseudogene predicted gene 8473