MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:108716721-108928123

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf212	5	108729290 to 108774982	45692	-	protein coding gene	ring finger protein 212
Tssr52461	5	108750957 to 108750995	38	-	TSS region	transcription start site region 52461
Tssr52462	5	108760055 to 108760069	14	-	TSS region	transcription start site region 52462
Gm46931	5	108760188 to 108763210	3022	+	pseudogene	predicted gene, 46931
Tssr47855	5	108762559 to 108762564	5	+	TSS region	transcription start site region 47855
1700047L14Rik	5	108763842 to 108768914	5072	+	antisense lncRNA gene	RIKEN cDNA 1700047L14 gene
Cpgi16209	5	108774716 to 108775266	550		CpG island	CpG island 16209
Tssr52463	5	108775021 to 108775032	11	-	TSS region	transcription start site region 52463
Tmed11	5	108777235 to 108795363	18128	-	protein coding gene	transmembrane p24 trafficking protein 11
Tssr52464	5	108795345 to 108795351	6	-	TSS region	transcription start site region 52464
Tssr52465	5	108795352 to 108795374	22	-	TSS region	transcription start site region 52465
Vmn2r8	5	108797193 to 108808754	11561	-	protein coding gene	vomeronasal 2, receptor 8
Gm18594	5	108821721 to 108823123	1402	+	pseudogene	predicted gene, 18594
Vmn2r9	5	108842947 to 108852510	9563	-	protein coding gene	vomeronasal 2, receptor 9
Gm10417	5	108864833 to 108868354	3521	+	protein coding gene	predicted gene 10417
Vmn2r-ps21	5	108873215 to 108892353	19138	-	pseudogene	vomeronasal 2, receptor, pseudogene 21
Cpgi16210	5	108903219 to 108903529	310		CpG island	CpG island 16210
Gm42627	5	108903226 to 108903449	223	+	pseudogene	predicted gene 42627