Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108671721-108973123

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Idua 5 108660331 to 108684557 24226 + protein coding gene iduronidase, alpha-L
Slc26a1 5 108669878 to 108675569 5691 - protein coding gene solute carrier family 26 (sulfate transporter), member 1
Tssr52450 5 108674776 to 108674785 9 - TSS region transcription start site region 52450
Tssr52451 5 108674787 to 108674802 15 - TSS region transcription start site region 52451
Tssr52452 5 108674809 to 108674815 6 - TSS region transcription start site region 52452
Tssr52453 5 108675316 to 108675383 67 - TSS region transcription start site region 52453
Tssr52454 5 108675594 to 108675626 32 - TSS region transcription start site region 52454
Tssr52455 5 108675640 to 108675652 12 - TSS region transcription start site region 52455
Tssr52456 5 108675658 to 108675671 13 - TSS region transcription start site region 52456
Cpgi16207 5 108677520 to 108677910 390 CpG island CpG island 16207
Tssr52457 5 108678457 to 108678489 32 - TSS region transcription start site region 52457
Tssr47850 5 108683538 to 108683552 14 + TSS region transcription start site region 47850
Gm42151 5 108683903 to 108694143 10240 - lncRNA gene predicted gene, 42151
Cpgi16208 5 108693828 to 108695267 1439 CpG island CpG island 16208
Tssr52458 5 108693968 to 108694005 37 - TSS region transcription start site region 52458
Tssr52459 5 108694033 to 108694045 12 - TSS region transcription start site region 52459
Tssr52460 5 108694059 to 108694109 50 - TSS region transcription start site region 52460
Tssr1580 5 108694199 to 108694217 18 + TSS region transcription start site region 1580
Tssr47851 5 108694222 to 108694255 33 + TSS region transcription start site region 47851
Fgfrl1 5 108694229 to 108706950 12721 + protein coding gene fibroblast growth factor receptor-like 1
Tssr47852 5 108694259 to 108694270 11 + TSS region transcription start site region 47852
Tssr47853 5 108694357 to 108694366 9 + TSS region transcription start site region 47853
Tssr1581 5 108694428 to 108694459 31 + TSS region transcription start site region 1581
Tssr47854 5 108704566 to 108704596 30 + TSS region transcription start site region 47854
Rnf212 5 108729290 to 108774982 45692 - protein coding gene ring finger protein 212
Tssr52461 5 108750957 to 108750995 38 - TSS region transcription start site region 52461
Tssr52462 5 108760055 to 108760069 14 - TSS region transcription start site region 52462
Gm46931 5 108760188 to 108763210 3022 + pseudogene predicted gene, 46931
Tssr47855 5 108762559 to 108762564 5 + TSS region transcription start site region 47855
1700047L14Rik 5 108763842 to 108768914 5072 + antisense lncRNA gene RIKEN cDNA 1700047L14 gene
Cpgi16209 5 108774716 to 108775266 550 CpG island CpG island 16209
Tssr52463 5 108775021 to 108775032 11 - TSS region transcription start site region 52463
Tmed11 5 108777235 to 108795363 18128 - protein coding gene transmembrane p24 trafficking protein 11
Tssr52464 5 108795345 to 108795351 6 - TSS region transcription start site region 52464
Tssr52465 5 108795352 to 108795374 22 - TSS region transcription start site region 52465
Vmn2r8 5 108797193 to 108808754 11561 - protein coding gene vomeronasal 2, receptor 8
Gm18594 5 108821721 to 108823123 1402 + pseudogene predicted gene, 18594
Vmn2r9 5 108842947 to 108852510 9563 - protein coding gene vomeronasal 2, receptor 9
Gm10417 5 108864833 to 108868354 3521 + protein coding gene predicted gene 10417
Vmn2r-ps21 5 108873215 to 108892353 19138 - pseudogene vomeronasal 2, receptor, pseudogene 21
Cpgi16210 5 108903219 to 108903529 310 CpG island CpG island 16210
Gm42627 5 108903226 to 108903449 223 + pseudogene predicted gene 42627
Gm20629 5 108943914 to 108949415 5501 + antisense lncRNA gene predicted gene 20629
Gm18971 5 108971677 to 108972050 373 + pseudogene predicted gene, 18971
Gm18595 5 108972806 to 108975895 3089 + pseudogene predicted gene, 18595