Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108533521-108665626

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplx1 5 108518554 to 108550024 31470 - protein coding gene complexin 1
Tssr52434 5 108548558 to 108548570 12 - TSS region transcription start site region 52434
Tssr52435 5 108548601 to 108548610 9 - TSS region transcription start site region 52435
Tssr52436 5 108548841 to 108548852 11 - TSS region transcription start site region 52436
Cpgi16203 5 108549355 to 108550362 1007 CpG island CpG island 16203
Tssr52437 5 108549934 to 108550002 68 - TSS region transcription start site region 52437
Gm3907 5 108550080 to 108553353 3273 unclassified gene predicted gene 3907
Gm43364 5 108550081 to 108553354 3273 - unclassified gene predicted gene 43364
Tssr52438 5 108550175 to 108550208 33 - TSS region transcription start site region 52438
Gak 5 108569411 to 108629755 60344 - protein coding gene cyclin G associated kinase
Tssr52439 5 108582141 to 108582164 23 - TSS region transcription start site region 52439
Tssr52440 5 108582860 to 108582879 19 - TSS region transcription start site region 52440
Tssr52441 5 108587814 to 108587819 5 - TSS region transcription start site region 52441
Tssr52442 5 108594418 to 108594422 4 - TSS region transcription start site region 52442
Gm43365 5 108598521 to 108600626 2105 - unclassified gene predicted gene 43365
D5Mit338 5 108614643 to 108614761 118 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 338
Nmf15 5 108614643 to 140687148 32072505 heritable phenotypic marker neuroscience mutagenesis facility, 15
repro14 5 108614643 to 113883925 5269282 heritable phenotypic marker reproductive mutant 14, JAX Reproductive Mutagenesis Program
Hmtb4 5 108614643 to 126805880 18191237 QTL hemostasis and thrombosis rebleeding time 4
Rgcs1 5 108614761 to 55230992 -53383769 QTL retinal ganglion cell susceptible 1
Tssr47843 5 108620221 to 108620225 4 + TSS region transcription start site region 47843
Cpgi16204 5 108629144 to 108630309 1165 CpG island CpG island 16204
Tssr52443 5 108629671 to 108629678 7 - TSS region transcription start site region 52443
Tssr52444 5 108629686 to 108629707 21 - TSS region transcription start site region 52444
Tssr52445 5 108629712 to 108629761 49 - TSS region transcription start site region 52445
Tmem175 5 108629747 to 108647770 18023 + protein coding gene transmembrane protein 175
Tssr47844 5 108629791 to 108629876 85 + TSS region transcription start site region 47844
Tssr47845 5 108629990 to 108630018 28 + TSS region transcription start site region 47845
Tssr47846 5 108630028 to 108630050 22 + TSS region transcription start site region 47846
0710007G10Rik 5 108644820 to 108645095 275 unclassified gene RIKEN cDNA 0710007G10 gene
Dgkq 5 108647044 to 108660827 13783 - protein coding gene diacylglycerol kinase, theta
Cpgi16205 5 108660264 to 108661060 796 CpG island CpG island 16205
Idua 5 108660331 to 108684557 24226 + protein coding gene iduronidase, alpha-L
Tssr52446 5 108660744 to 108660778 34 - TSS region transcription start site region 52446
Tssr52447 5 108660783 to 108660822 39 - TSS region transcription start site region 52447