Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108401934-108446894

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pde6b	5	108388373 to 108431743	43370	+	protein coding gene	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
Gm34254	5	108402034 to 108405574	3540	-	lncRNA gene	predicted gene, 34254
Tssr47832	5	108404857 to 108404881	24	+	TSS region	transcription start site region 47832
Tssr47833	5	108404934 to 108404946	12	+	TSS region	transcription start site region 47833
Tssr47834	5	108404973 to 108404978	5	+	TSS region	transcription start site region 47834
Tssr52417	5	108405515 to 108405540	25	-	TSS region	transcription start site region 52417
Tssr52418	5	108405556 to 108405567	11	-	TSS region	transcription start site region 52418
Tssr47835	5	108406052 to 108406059	7	+	TSS region	transcription start site region 47835
Gm34204	5	108421934 to 108426894	4960	-	lncRNA gene	predicted gene, 34204
Atp5k	5	108433253 to 108434378	1125	-	protein coding gene	ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E
Cpgi16200	5	108433932 to 108434717	785		CpG island	CpG island 16200
Tssr52419	5	108434359 to 108434370	11	-	TSS region	transcription start site region 52419
Tssr52420	5	108434373 to 108434409	36	-	TSS region	transcription start site region 52420
Tssr47836	5	108434447 to 108434458	11	+	TSS region	transcription start site region 47836
Gm34319	5	108434528 to 108441598	7070	+	lncRNA gene	predicted gene, 34319
Mfsd7a	5	108441054 to 108448891	7837	-	protein coding gene	major facilitator superfamily domain containing 7A