Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:108247784-108377823

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16196 5 108268452 to 108269730 1278 CpG island CpG island 16196
Dr1 5 108268897 to 108280521 11624 + protein coding gene down-regulator of transcription 1
Tssr47811 5 108268897 to 108268924 27 + TSS region transcription start site region 47811
Tssr47812 5 108268929 to 108268980 51 + TSS region transcription start site region 47812
Tssr47813 5 108269290 to 108269302 12 + TSS region transcription start site region 47813
Tssr47814 5 108269419 to 108269441 22 + TSS region transcription start site region 47814
Tssr47815 5 108269444 to 108269470 26 + TSS region transcription start site region 47815
Tssr47816 5 108269647 to 108269660 13 + TSS region transcription start site region 47816
Tssr47817 5 108269663 to 108269677 14 + TSS region transcription start site region 47817
Tssr47818 5 108279031 to 108279044 13 + TSS region transcription start site region 47818
Tssr47819 5 108279131 to 108279143 12 + TSS region transcription start site region 47819
Tssr47820 5 108279427 to 108279453 26 + TSS region transcription start site region 47820
Tssr47821 5 108279483 to 108279498 15 + TSS region transcription start site region 47821
Tssr47822 5 108279509 to 108279521 12 + TSS region transcription start site region 47822
Tssr47823 5 108279630 to 108279643 13 + TSS region transcription start site region 47823
D5Mit315 5 108305388 to 108305508 120 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 315
Gm43081 5 108311370 to 108312749 1379 - unclassified gene predicted gene 43081
Cpgi16197 5 108312299 to 108313282 983 CpG island CpG island 16197
Pigg 5 108312782 to 108349355 36573 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class G
Tssr47824 5 108312784 to 108312823 39 + TSS region transcription start site region 47824
9330198I05Rik 5 108360187 to 108363885 3698 + lincRNA gene RIKEN cDNA 9330198I05 gene
Gm42518 5 108364037 to 108364974 937 - lincRNA gene predicted gene 42518
Gm42517 5 108366073 to 108367922 1849 - protein coding gene predicted gene 42517
Cpgi16198 5 108366434 to 108369682 3248 CpG island CpG island 16198
Tssr47825 5 108367732 to 108367774 42 + TSS region transcription start site region 47825
Tssr52414 5 108367895 to 108367922 27 - TSS region transcription start site region 52414
Gm10419 5 108367994 to 108374478 6484 + lincRNA gene predicted gene 10419
Tssr52415 5 108369406 to 108369431 25 - TSS region transcription start site region 52415