Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Ccdc18 | 5 | 100152 | + | protein coding gene | coiled-coil domain containing 18 | |
Gm43083 | 5 | 475 | - | pseudogene | predicted gene 43083 | |
Cpgi16196 | 5 | 1278 | CpG island | CpG island 16196 | ||
Dr1 | 5 | 11624 | + | protein coding gene | down-regulator of transcription 1 | |
Tssr47811 | 5 | 27 | + | TSS region | transcription start site region 47811 | |
Tssr47812 | 5 | 51 | + | TSS region | transcription start site region 47812 | |
Tssr47813 | 5 | 12 | + | TSS region | transcription start site region 47813 | |
Tssr47814 | 5 | 22 | + | TSS region | transcription start site region 47814 | |
Tssr47815 | 5 | 26 | + | TSS region | transcription start site region 47815 | |
Tssr47816 | 5 | 13 | + | TSS region | transcription start site region 47816 | |
Tssr47817 | 5 | 14 | + | TSS region | transcription start site region 47817 | |
Tssr47818 | 5 | 13 | + | TSS region | transcription start site region 47818 | |
Tssr47819 | 5 | 12 | + | TSS region | transcription start site region 47819 | |
Tssr47820 | 5 | 26 | + | TSS region | transcription start site region 47820 | |
Tssr47821 | 5 | 15 | + | TSS region | transcription start site region 47821 | |
Tssr47822 | 5 | 12 | + | TSS region | transcription start site region 47822 | |
Tssr47823 | 5 | 13 | + | TSS region | transcription start site region 47823 | |
D5Mit315 | 5 | 120 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 315 | ||
Gm43081 | 5 | 1379 | - | unclassified gene | predicted gene 43081 | |
Cpgi16197 | 5 | 983 | CpG island | CpG island 16197 | ||
Pigg | 5 | 36573 | + | protein coding gene | phosphatidylinositol glycan anchor biosynthesis, class G | |
Tssr47824 | 5 | 39 | + | TSS region | transcription start site region 47824 | |
9330198I05Rik | 5 | 3698 | + | lincRNA gene | RIKEN cDNA 9330198I05 gene | |
Gm42518 | 5 | 937 | - | lincRNA gene | predicted gene 42518 | |
Gm42517 | 5 | 1849 | - | protein coding gene | predicted gene 42517 | |
Cpgi16198 | 5 | 3248 | CpG island | CpG island 16198 | ||
Tssr47825 | 5 | 42 | + | TSS region | transcription start site region 47825 | |
Tssr52414 | 5 | 27 | - | TSS region | transcription start site region 52414 | |
Gm10419 | 5 | 6484 | + | lincRNA gene | predicted gene 10419 | |
Tssr52415 | 5 | 25 | - | TSS region | transcription start site region 52415 | |
Pde6b | 5 | 43370 | + | protein coding gene | phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide | |
Tssr47826 | 5 | 11 | + | TSS region | transcription start site region 47826 | |
Tssr47827 | 5 | 6 | + | TSS region | transcription start site region 47827 | |
Tssr47828 | 5 | 22 | + | TSS region | transcription start site region 47828 | |
Tssr47829 | 5 | 3 | + | TSS region | transcription start site region 47829 | |
Tssr47830 | 5 | 7 | + | TSS region | transcription start site region 47830 | |
Cpgi16199 | 5 | 204 | CpG island | CpG island 16199 | ||
Tssr52416 | 5 | 4 | - | TSS region | transcription start site region 52416 | |
Tssr47831 | 5 | 8 | + | TSS region | transcription start site region 47831 | |
Gm34254 | 5 | 3540 | - | lncRNA gene | predicted gene, 34254 | |
Tssr47832 | 5 | 24 | + | TSS region | transcription start site region 47832 | |
Tssr47833 | 5 | 12 | + | TSS region | transcription start site region 47833 | |
Tssr47834 | 5 | 5 | + | TSS region | transcription start site region 47834 | |
Tssr52417 | 5 | 25 | - | TSS region | transcription start site region 52417 | |
Tssr52418 | 5 | 11 | - | TSS region | transcription start site region 52418 | |
Tssr47835 | 5 | 7 | + | TSS region | transcription start site region 47835 | |
Gm34204 | 5 | 4960 | - | lncRNA gene | predicted gene, 34204 | |
Atp5k | 5 | 1125 | - | protein coding gene | ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit E | |
Cpgi16200 | 5 | 785 | CpG island | CpG island 16200 | ||
Tssr52419 | 5 | 11 | - | TSS region | transcription start site region 52419 | |
Tssr52420 | 5 | 36 | - | TSS region | transcription start site region 52420 | |
Tssr47836 | 5 | 11 | + | TSS region | transcription start site region 47836 | |
Gm34319 | 5 | 7070 | + | lncRNA gene | predicted gene, 34319 | |
Mfsd7a | 5 | 7837 | - | protein coding gene | major facilitator superfamily domain containing 7A | |
Tssr52421 | 5 | 11 | - | TSS region | transcription start site region 52421 | |
Cpgi16201 | 5 | 365 | CpG island | CpG island 16201 | ||
Tssr52422 | 5 | 30 | - | TSS region | transcription start site region 52422 | |
Tssr52423 | 5 | 11 | - | TSS region | transcription start site region 52423 | |
Tssr52424 | 5 | 17 | - | TSS region | transcription start site region 52424 | |
Tssr52425 | 5 | 11 | - | TSS region | transcription start site region 52425 | |
Cpgi16202 | 5 | 1106 | CpG island | CpG island 16202 | ||
Pcgf3 | 5 | 41884 | + | protein coding gene | polycomb group ring finger 3 | |
Tssr47837 | 5 | 19 | + | TSS region | transcription start site region 47837 | |
Tssr47838 | 5 | 54 | + | TSS region | transcription start site region 47838 | |
Tssr47839 | 5 | 34 | + | TSS region | transcription start site region 47839 | |
Tssr47840 | 5 | 11 | + | TSS region | transcription start site region 47840 | |
Tssr47841 | 5 | 10 | + | TSS region | transcription start site region 47841 | |
Gm10086 | 5 | 353 | + | pseudogene | predicted pseudogene 10086 | |
Cplx1 | 5 | 31470 | - | protein coding gene | complexin 1 | |
Tssr52426 | 5 | 11 | - | TSS region | transcription start site region 52426 | |
Tssr52427 | 5 | 10 | - | TSS region | transcription start site region 52427 | |
Tssr52428 | 5 | 12 | - | TSS region | transcription start site region 52428 | |
Tssr52429 | 5 | 17 | - | TSS region | transcription start site region 52429 | |
Tssr52430 | 5 | 25 | - | TSS region | transcription start site region 52430 | |
Tssr47842 | 5 | 19 | + | TSS region | transcription start site region 47842 | |
Tssr52431 | 5 | 11 | - | TSS region | transcription start site region 52431 | |
Tssr52432 | 5 | 21 | - | TSS region | transcription start site region 52432 | |
Tssr52433 | 5 | 4 | - | TSS region | transcription start site region 52433 | |
Tssr52434 | 5 | 12 | - | TSS region | transcription start site region 52434 | |
Tssr52435 | 5 | 9 | - | TSS region | transcription start site region 52435 | |
Tssr52436 | 5 | 11 | - | TSS region | transcription start site region 52436 | |
Cpgi16203 | 5 | 1007 | CpG island | CpG island 16203 | ||
Tssr52437 | 5 | 68 | - | TSS region | transcription start site region 52437 | |
Gm3907 | 5 | 3273 | unclassified gene | predicted gene 3907 | ||
Gm43364 | 5 | 3273 | - | unclassified gene | predicted gene 43364 | |
Tssr52438 | 5 | 33 | - | TSS region | transcription start site region 52438 | |
Gak | 5 | 60344 | - | protein coding gene | cyclin G associated kinase | |
Tssr52439 | 5 | 23 | - | TSS region | transcription start site region 52439 | |
Tssr52440 | 5 | 19 | - | TSS region | transcription start site region 52440 | |
Tssr52441 | 5 | 5 | - | TSS region | transcription start site region 52441 | |
Tssr52442 | 5 | 4 | - | TSS region | transcription start site region 52442 | |
Gm43365 | 5 | 2105 | - | unclassified gene | predicted gene 43365 | |
repro14 | 5 | 5269282 | heritable phenotypic marker | reproductive mutant 14, JAX Reproductive Mutagenesis Program | ||
D5Mit338 | 5 | 118 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 338 | ||
Hmtb4 | 5 | 18191237 | QTL | hemostasis and thrombosis rebleeding time 4 | ||
Nmf15 | 5 | 32072505 | heritable phenotypic marker | neuroscience mutagenesis facility, 15 | ||
Rgcs1 | 5 | -53383769 | QTL | retinal ganglion cell susceptible 1 | ||
Tssr47843 | 5 | 4 | + | TSS region | transcription start site region 47843 | |
Cpgi16204 | 5 | 1165 | CpG island | CpG island 16204 | ||
Tssr52443 | 5 | 7 | - | TSS region | transcription start site region 52443 | |
Tssr52444 | 5 | 21 | - | TSS region | transcription start site region 52444 | |
Tssr52445 | 5 | 49 | - | TSS region | transcription start site region 52445 | |
Tmem175 | 5 | 18023 | + | protein coding gene | transmembrane protein 175 | |
Tssr47844 | 5 | 85 | + | TSS region | transcription start site region 47844 | |
Tssr47845 | 5 | 28 | + | TSS region | transcription start site region 47845 | |
Tssr47846 | 5 | 22 | + | TSS region | transcription start site region 47846 | |
0710007G10Rik | 5 | 275 | unclassified gene | RIKEN cDNA 0710007G10 gene | ||
Dgkq | 5 | 13783 | - | protein coding gene | diacylglycerol kinase, theta | |
Cpgi16205 | 5 | 796 | CpG island | CpG island 16205 | ||
Idua | 5 | 24226 | + | protein coding gene | iduronidase, alpha-L | |
Tssr52446 | 5 | 34 | - | TSS region | transcription start site region 52446 | |
Tssr52447 | 5 | 39 | - | TSS region | transcription start site region 52447 | |
Cpgi16206 | 5 | 572 | CpG island | CpG island 16206 | ||
Tssr47847 | 5 | 51 | + | TSS region | transcription start site region 47847 | |
Tssr47848 | 5 | 16 | + | TSS region | transcription start site region 47848 | |
Tssr47849 | 5 | 7 | + | TSS region | transcription start site region 47849 | |
Slc26a1 | 5 | 5691 | - | protein coding gene | solute carrier family 26 (sulfate transporter), member 1 | |
Tssr52448 | 5 | 21 | - | TSS region | transcription start site region 52448 | |
Tssr52449 | 5 | 12 | - | TSS region | transcription start site region 52449 | |
Tssr52450 | 5 | 9 | - | TSS region | transcription start site region 52450 | |
Tssr52451 | 5 | 15 | - | TSS region | transcription start site region 52451 | |
Tssr52452 | 5 | 6 | - | TSS region | transcription start site region 52452 | |
Tssr52453 | 5 | 67 | - | TSS region | transcription start site region 52453 | |
Tssr52454 | 5 | 32 | - | TSS region | transcription start site region 52454 | |
Tssr52455 | 5 | 12 | - | TSS region | transcription start site region 52455 | |
Tssr52456 | 5 | 13 | - | TSS region | transcription start site region 52456 | |
Cpgi16207 | 5 | 390 | CpG island | CpG island 16207 | ||
Tssr52457 | 5 | 32 | - | TSS region | transcription start site region 52457 | |
Tssr47850 | 5 | 14 | + | TSS region | transcription start site region 47850 | |
Gm42151 | 5 | 10240 | - | lncRNA gene | predicted gene, 42151 | |
Cpgi16208 | 5 | 1439 | CpG island | CpG island 16208 | ||
Tssr52458 | 5 | 37 | - | TSS region | transcription start site region 52458 | |
Tssr52459 | 5 | 12 | - | TSS region | transcription start site region 52459 | |
Tssr52460 | 5 | 50 | - | TSS region | transcription start site region 52460 | |
Tssr1580 | 5 | 18 | + | TSS region | transcription start site region 1580 | |
Tssr47851 | 5 | 33 | + | TSS region | transcription start site region 47851 | |
Fgfrl1 | 5 | 12721 | + | protein coding gene | fibroblast growth factor receptor-like 1 | |
Tssr47852 | 5 | 11 | + | TSS region | transcription start site region 47852 | |
Tssr47853 | 5 | 9 | + | TSS region | transcription start site region 47853 | |
Tssr1581 | 5 | 31 | + | TSS region | transcription start site region 1581 | |
Tssr47854 | 5 | 30 | + | TSS region | transcription start site region 47854 | |
Rnf212 | 5 | 45692 | - | protein coding gene | ring finger protein 212 | |
Tssr52461 | 5 | 38 | - | TSS region | transcription start site region 52461 | |
Tssr52462 | 5 | 14 | - | TSS region | transcription start site region 52462 | |
Gm46931 | 5 | 3022 | + | pseudogene | predicted gene, 46931 | |
Tssr47855 | 5 | 5 | + | TSS region | transcription start site region 47855 | |
1700047L14Rik | 5 | 5072 | + | antisense lncRNA gene | RIKEN cDNA 1700047L14 gene | |
Cpgi16209 | 5 | 550 | CpG island | CpG island 16209 | ||
Tssr52463 | 5 | 11 | - | TSS region | transcription start site region 52463 | |
Tmed11 | 5 | 18128 | - | protein coding gene | transmembrane p24 trafficking protein 11 | |
Tssr52464 | 5 | 6 | - | TSS region | transcription start site region 52464 | |
Tssr52465 | 5 | 22 | - | TSS region | transcription start site region 52465 | |
Vmn2r8 | 5 | 11561 | - | protein coding gene | vomeronasal 2, receptor 8 | |
Gm18594 | 5 | 1402 | + | pseudogene | predicted gene, 18594 | |
Vmn2r9 | 5 | 9563 | - | protein coding gene | vomeronasal 2, receptor 9 | |
Gm10417 | 5 | 3521 | + | protein coding gene | predicted gene 10417 | |
Vmn2r-ps21 | 5 | 19138 | - | pseudogene | vomeronasal 2, receptor, pseudogene 21 | |
Cpgi16210 | 5 | 310 | CpG island | CpG island 16210 | ||
Gm42627 | 5 | 223 | + | pseudogene | predicted gene 42627 | |
Gm20629 | 5 | 5501 | + | antisense lncRNA gene | predicted gene 20629 | |
Gm18971 | 5 | 373 | + | pseudogene | predicted gene, 18971 | |
Gm18595 | 5 | 3089 | + | pseudogene | predicted gene, 18595 | |
Vmn2r10 | 5 | 10897 | - | protein coding gene | vomeronasal 2, receptor 10 | |
Tssr52466 | 5 | 31 | - | TSS region | transcription start site region 52466 | |
Gm5871 | 5 | 717 | - | pseudogene | predicted gene 5871 | |
Tssr52467 | 5 | 19 | - | TSS region | transcription start site region 52467 | |
Vmn2r11 | 5 | 12579 | - | protein coding gene | vomeronasal 2, receptor 11 | |
Tssr47856 | 5 | 11 | + | TSS region | transcription start site region 47856 | |
Tssr47857 | 5 | 10 | + | TSS region | transcription start site region 47857 | |
Tssr47858 | 5 | 5 | + | TSS region | transcription start site region 47858 | |
Vmn2r12 | 5 | 12015 | - | protein coding gene | vomeronasal 2, receptor 12 | |
D5Mit240 | 5 | 149 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 240 | ||
Hypch | 5 | 30042392 | QTL | hypercholesterolemia |