Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:107547373-107711838

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm42669	5	107507621 to 107580596	72975	+	protein coding gene	predicted gene 42669
1700028K03Rik	5	107534711 to 107551542	16831	+	protein coding gene	RIKEN cDNA 1700028K03 gene
Glmn	5	107548967 to 107597888	48921	-	protein coding gene	glomulin, FKBP associated protein
Cpgi16186	5	107597213 to 107598152	939		CpG island	CpG island 16186
Rpap2	5	107597373 to 107661838	64465	+	protein coding gene	RNA polymerase II associated protein 2
Tssr52377	5	107597533 to 107597545	12	-	TSS region	transcription start site region 52377
Tssr52378	5	107597595 to 107597625	30	-	TSS region	transcription start site region 52378
Tssr47777	5	107597696 to 107597731	35	+	TSS region	transcription start site region 47777
Tssr47778	5	107597741 to 107597756	15	+	TSS region	transcription start site region 47778
Tssr47779	5	107597760 to 107597784	24	+	TSS region	transcription start site region 47779
A930041C12Rik	5	107630250 to 107633850	3600	-	antisense lncRNA gene	RIKEN cDNA A930041C12 gene
5830490A12Rik	5	107655679 to 107657434	1755		unclassified gene	RIKEN cDNA 5830490A12 gene
Gm26692	5	107659461 to 107688010	28549	-	lincRNA gene	predicted gene, 26692
Cpgi16187	5	107687885 to 107688344	459		CpG island	CpG island 16187
Tssr52379	5	107687990 to 107688025	35	-	TSS region	transcription start site region 52379
Tssr47780	5	107688158 to 107688179	21	+	TSS region	transcription start site region 47780
5830411K02Rik	5	107688171 to 107689167	996	+	unclassified gene	RIKEN cDNA 5830411K02 gene
4930428O21Rik	5	107698212 to 107703480	5268	-	lincRNA gene	RIKEN cDNA 4930428O21 gene