Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:107547373-107711838

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm42669 5 107507621 to 107580596 72975 + protein coding gene predicted gene 42669
1700028K03Rik 5 107534711 to 107551542 16831 + protein coding gene RIKEN cDNA 1700028K03 gene
Glmn 5 107548967 to 107597888 48921 - protein coding gene glomulin, FKBP associated protein
Cpgi16186 5 107597213 to 107598152 939 CpG island CpG island 16186
Rpap2 5 107597373 to 107661838 64465 + protein coding gene RNA polymerase II associated protein 2
Tssr52377 5 107597533 to 107597545 12 - TSS region transcription start site region 52377
Tssr52378 5 107597595 to 107597625 30 - TSS region transcription start site region 52378
Tssr47777 5 107597696 to 107597731 35 + TSS region transcription start site region 47777
Tssr47778 5 107597741 to 107597756 15 + TSS region transcription start site region 47778
Tssr47779 5 107597760 to 107597784 24 + TSS region transcription start site region 47779
A930041C12Rik 5 107630250 to 107633850 3600 - antisense lncRNA gene RIKEN cDNA A930041C12 gene
5830490A12Rik 5 107655679 to 107657434 1755 unclassified gene RIKEN cDNA 5830490A12 gene
Gm26692 5 107659461 to 107688010 28549 - lincRNA gene predicted gene, 26692
Cpgi16187 5 107687885 to 107688344 459 CpG island CpG island 16187
Tssr52379 5 107687990 to 107688025 35 - TSS region transcription start site region 52379
Tssr47780 5 107688158 to 107688179 21 + TSS region transcription start site region 47780
5830411K02Rik 5 107688171 to 107689167 996 + unclassified gene RIKEN cDNA 5830411K02 gene
4930428O21Rik 5 107698212 to 107703480 5268 - lincRNA gene RIKEN cDNA 4930428O21 gene