MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:107398513-107435035

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm42902	5	107392731 to 107403480	10749	-	antisense lncRNA gene	predicted gene 42902
n-R5s173	5	107401319 to 107401437	118	+	rRNA gene	nuclear encoded rRNA 5S 173
Cpgi16184	5	107402956 to 107404052	1096		CpG island	CpG island 16184
Ephx4	5	107403513 to 107430035	26522	+	protein coding gene	epoxide hydrolase 4
Tssr47766	5	107403524 to 107403534	10	+	TSS region	transcription start site region 47766
Tssr47767	5	107403591 to 107403611	20	+	TSS region	transcription start site region 47767
Tssr52371	5	107403620 to 107403638	18	-	TSS region	transcription start site region 52371
Gm17202	5	107404823 to 107431910	27087	-	antisense lncRNA gene	predicted gene 17202
Tssr52372	5	107406361 to 107406386	25	-	TSS region	transcription start site region 52372
Hycdc	5	107413140 to 107413285	145		QTL	hypercapnic duty cycle
D5Mit239	5	107413140 to 107413285	145		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 239
Cfsw2	5	107413140 to 107413285	145		QTL	cystic fibrosis survival to weaning 2
Mdmsc2	5	107413140 to 112286920	4873780		QTL	modifier of muscularity 2
Tssr47768	5	107431541 to 107431558	17	+	TSS region	transcription start site region 47768
Lpcat2b	5	107431549 to 107435039	3490	+	protein coding gene	lysophosphatidylcholine acyltransferase 2B
Tssr47769	5	107431565 to 107431571	6	+	TSS region	transcription start site region 47769
Tssr52373	5	107431874 to 107431880	6	-	TSS region	transcription start site region 52373
Tssr52374	5	107431934 to 107431940	6	-	TSS region	transcription start site region 52374