Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:107179530-107399551

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgfbr3 5 107106570 to 107289595 183025 - protein coding gene transforming growth factor, beta receptor III
Tssr52364 5 107192358 to 107192371 13 - TSS region transcription start site region 52364
Gm8145 5 107241623 to 107242367 744 + pseudogene predicted gene 8145
Gm42900 5 107254338 to 107256504 2166 - unclassified gene predicted gene 42900
Cpgi16181 5 107288381 to 107289929 1548 CpG island CpG island 16181
Tssr52365 5 107289289 to 107289300 11 - TSS region transcription start site region 52365
Tssr52366 5 107289363 to 107289378 15 - TSS region transcription start site region 52366
Tssr52367 5 107289432 to 107289443 11 - TSS region transcription start site region 52367
Tssr52368 5 107289496 to 107289525 29 - TSS region transcription start site region 52368
Tssr52369 5 107289530 to 107289551 21 - TSS region transcription start site region 52369
Tssr52370 5 107289561 to 107289637 76 - TSS region transcription start site region 52370
Gm22557 5 107302946 to 107303047 101 + snRNA gene predicted gene, 22557
Cpgi16182 5 107330914 to 107331452 538 CpG island CpG island 16182
Tssr47760 5 107331137 to 107331146 9 + TSS region transcription start site region 47760
Tssr47761 5 107331157 to 107331197 40 + TSS region transcription start site region 47761
Brdt 5 107331159 to 107387058 55899 + protein coding gene bromodomain, testis-specific
Tssr47762 5 107333118 to 107333134 16 + TSS region transcription start site region 47762
Cpgi16183 5 107359440 to 107360025 585 CpG island CpG island 16183
Tssr47763 5 107359543 to 107359586 43 + TSS region transcription start site region 47763
Tssr47764 5 107359606 to 107359618 12 + TSS region transcription start site region 47764
Tssr47765 5 107359826 to 107359849 23 + TSS region transcription start site region 47765
Gm8152 5 107381381 to 107382017 636 - pseudogene predicted gene 8152
Gm42902 5 107392731 to 107403480 10749 - antisense lncRNA gene predicted gene 42902