Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:106501759-106891784

Filter by:
35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28050 5 106500893 to 106515981 15088 - lincRNA gene predicted gene, 28050
Gm33283 5 106519878 to 106528821 8943 + lncRNA gene predicted gene, 33283
Gm8350 5 106557732 to 106578906 21174 - unclassified gene predicted gene 8350
Gm28039 5 106557946 to 106696571 138625 - unclassified non-coding RNA gene predicted gene, 28039
Cpgi16173 5 106560328 to 106560553 225 CpG island CpG island 16173
Cpgi16174 5 106561110 to 106561696 586 CpG island CpG island 16174
Cpgi16175 5 106573904 to 106575023 1119 CpG island CpG island 16175
Tssr52342 5 106574680 to 106574698 18 - TSS region transcription start site region 52342
Tssr52343 5 106574706 to 106574727 21 - TSS region transcription start site region 52343
Gm29464 5 106574875 to 106575387 512 + lincRNA gene predicted gene 29464
Gm42145 5 106592982 to 106608169 15187 - lncRNA gene predicted gene, 42145
Gm17304 5 106609098 to 106609201 103 + protein coding gene predicted gene, 17304
Gm17937 5 106610321 to 106611025 704 + pseudogene predicted gene, 17937
Tssr52344 5 106614307 to 106614311 4 - TSS region transcription start site region 52344
Zfp644 5 106616739 to 106696830 80091 - protein coding gene zinc finger protein 644
Tssr52345 5 106624354 to 106624361 7 - TSS region transcription start site region 52345
Tssr52346 5 106624394 to 106624404 10 - TSS region transcription start site region 52346
Tssr52347 5 106624410 to 106624417 7 - TSS region transcription start site region 52347
Gm43421 5 106652809 to 106655713 2904 - unclassified gene predicted gene 43421
Gm24191 5 106669999 to 106670120 121 + snRNA gene predicted gene, 24191
Tssr52348 5 106680318 to 106680321 3 - TSS region transcription start site region 52348
Tssr52349 5 106691142 to 106691158 16 - TSS region transcription start site region 52349
Cpgi16176 5 106695747 to 106697160 1413 CpG island CpG island 16176
Tssr52350 5 106696530 to 106696586 56 - TSS region transcription start site region 52350
Tssr52351 5 106696759 to 106696784 25 - TSS region transcription start site region 52351
Tssr52352 5 106696788 to 106696816 28 - TSS region transcription start site region 52352
Tssr52353 5 106696819 to 106696839 20 - TSS region transcription start site region 52353
Tssr1578 5 106705528 to 106705531 3 + TSS region transcription start site region 1578
Gm8365 5 106738117 to 106738764 647 - pseudogene predicted gene 8365
Gm33327 5 106802021 to 106814773 12752 + lncRNA gene predicted gene, 33327
Cpgi16177 5 106802289 to 106802765 476 CpG island CpG island 16177
Cpgi16178 5 106825449 to 106825694 245 CpG island CpG island 16178
Hfm1 5 106840192 to 106926321 86129 - protein coding gene HFM1, ATP-dependent DNA helicase homolog
Gm27527 5 106879600 to 106879698 98 - miRNA gene predicted gene, 27527
Tssr52354 5 106879911 to 106879915 4 - TSS region transcription start site region 52354