Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:105836864-106527119

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr47750 5 105843763 to 105843764 1 + TSS region transcription start site region 47750
Gm10359 5 105862701 to 105863702 1001 - pseudogene predicted gene 10359
Gm43818 5 105866361 to 105866826 465 + pseudogene predicted gene 43818
1700061D13Rik 5 105866372 to 105866777 405 unclassified gene RIKEN cDNA 1700061D13 gene
Tssr47751 5 105876220 to 105876222 2 + TSS region transcription start site region 47751
Cpgi16157 5 105876261 to 105877413 1152 CpG island CpG island 16157
Tssr47752 5 105876532 to 105876585 53 + TSS region transcription start site region 47752
Zfp326 5 105876568 to 105915818 39250 + protein coding gene zinc finger protein 326
Gm43817 5 105879583 to 105881844 2261 + unclassified gene predicted gene 43817
4632409D06Rik 5 105958667 to 105961431 2764 unclassified gene RIKEN cDNA 4632409D06 gene
Gm19566 5 105980573 to 105981182 609 - pseudogene predicted gene, 19566
Cpgi16158 5 106038224 to 106038550 326 CpG island CpG island 16158
Gm25672 5 106072327 to 106072433 106 - snRNA gene predicted gene, 25672
Gm32736 5 106095091 to 106103547 8456 + lincRNA gene predicted gene, 32736
Cpgi16159 5 106181864 to 106182119 255 CpG island CpG island 16159
Gm5987 5 106215651 to 106216801 1150 + pseudogene predicted gene 5987
Gm38433 5 106272238 to 106272871 633 + pseudogene predicted gene, 38433
Tssr47753 5 106294152 to 106294159 7 + TSS region transcription start site region 47753
Gm32973 5 106295339 to 106322494 27155 - lncRNA gene predicted gene, 32973
Gm32921 5 106321340 to 106323217 1877 + lincRNA gene predicted gene, 32921
Tssr47754 5 106351507 to 106351521 14 + TSS region transcription start site region 47754
Tssr47755 5 106351528 to 106351552 24 + TSS region transcription start site region 47755
4930458A03Rik 5 106351535 to 106364234 12699 + lincRNA gene RIKEN cDNA 4930458A03 gene
Tssr1576 5 106351566 to 106351573 7 + TSS region transcription start site region 1576
Cpgi16160 5 106353715 to 106353909 194 CpG island CpG island 16160
Gm42915 5 106355362 to 106355684 322 - pseudogene predicted gene 42915
Cpgi16161 5 106363706 to 106363979 273 CpG island CpG island 16161
4930432H08Rik 5 106364561 to 106366849 2288 - lincRNA gene RIKEN cDNA 4930432H08 gene
Gm42916 5 106369012 to 106370818 1806 + lincRNA gene predicted gene 42916
Tssr1577 5 106445296 to 106445298 2 - TSS region transcription start site region 1577
Cpgi16162 5 106448173 to 106448712 539 CpG island CpG island 16162
Cpgi16163 5 106451806 to 106452250 444 CpG island CpG island 16163
Barhl2 5 106452523 to 106458166 5643 - protein coding gene BarH like homeobox 2
D5Mit1002 5 106452954 to 106453103 149 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 1002
Cpgi16164 5 106453262 to 106453927 665 CpG island CpG island 16164
Cpgi16165 5 106457057 to 106459644 2587 CpG island CpG island 16165
Tssr52338 5 106457943 to 106457954 11 - TSS region transcription start site region 52338
Tssr52339 5 106458409 to 106458418 9 - TSS region transcription start site region 52339
Tssr52340 5 106458455 to 106458470 15 - TSS region transcription start site region 52340
Tssr52341 5 106458477 to 106458496 19 - TSS region transcription start site region 52341
Gm33151 5 106458586 to 106459739 1153 + lncRNA gene predicted gene, 33151
Tssr47756 5 106458679 to 106458701 22 + TSS region transcription start site region 47756
Cpgi16166 5 106460054 to 106460572 518 CpG island CpG island 16166
Cpgi16167 5 106463652 to 106464100 448 CpG island CpG island 16167
Cpgi16168 5 106465109 to 106465337 228 CpG island CpG island 16168
Cpgi16169 5 106465605 to 106466087 482 CpG island CpG island 16169
Gm26872 5 106465800 to 106471007 5207 - lincRNA gene predicted gene, 26872
Cpgi16170 5 106467320 to 106467631 311 CpG island CpG island 16170
Cpgi16171 5 106469555 to 106469857 302 CpG island CpG island 16171
Cpgi16172 5 106470488 to 106471093 605 CpG island CpG island 16172
Gm28050 5 106500893 to 106515981 15088 - lincRNA gene predicted gene, 28050
Gm33283 5 106519878 to 106528821 8943 + lncRNA gene predicted gene, 33283