Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:105335408-105465418

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gbp11 5 105323042 to 105346472 23430 - polymorphic pseudogene guanylate binding protein 11
Tssr52314 5 105339050 to 105339065 15 - TSS region transcription start site region 52314
Tssr52315 5 105343242 to 105343251 9 - TSS region transcription start site region 52315
Tssr52316 5 105345927 to 105345932 5 - TSS region transcription start site region 52316
Tssr52317 5 105346479 to 105346489 10 - TSS region transcription start site region 52317
Tssr52318 5 105346519 to 105346548 29 - TSS region transcription start site region 52318
B230204H03Rik 5 105398905 to 105400155 1250 unclassified gene RIKEN cDNA B230204H03 gene
Tssr52319 5 105400103 to 105400114 11 - TSS region transcription start site region 52319
Tssr47675 5 105400408 to 105400418 10 + TSS region transcription start site region 47675
Gm26519 5 105401245 to 105406970 5725 + lincRNA gene predicted gene, 26519
Tssr47676 5 105409341 to 105409373 32 + TSS region transcription start site region 47676
Gm32051 5 105409348 to 105413922 4574 + lincRNA gene predicted gene, 32051
4930542N06Rik 5 105413286 to 105415307 2021 - lncRNA gene RIKEN cDNA 4930542N06 gene
Cpgi16151 5 105415218 to 105416501 1283 CpG island CpG island 16151
Tssr52320 5 105415687 to 105415704 17 - TSS region transcription start site region 52320
Tssr47677 5 105415690 to 105415730 40 + TSS region transcription start site region 47677
Tssr52321 5 105415718 to 105415729 11 - TSS region transcription start site region 52321
Tssr47678 5 105415738 to 105415849 111 + TSS region transcription start site region 47678
Lrrc8b 5 105415775 to 105490071 74296 + protein coding gene leucine rich repeat containing 8 family, member B
Tssr47679 5 105446871 to 105446896 25 + TSS region transcription start site region 47679