Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:105254348-105568922

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43302 5 105214907 to 105293695 78788 - protein coding gene predicted gene 43302
Gbp6 5 105270702 to 105293698 22996 - protein coding gene guanylate binding protein 6
Tssr47674 5 105274179 to 105274224 45 + TSS region transcription start site region 47674
Tssr52308 5 105281787 to 105281797 10 - TSS region transcription start site region 52308
Tssr52309 5 105288074 to 105288093 19 - TSS region transcription start site region 52309
Tssr52310 5 105293688 to 105293705 17 - TSS region transcription start site region 52310
Tssr52311 5 105293727 to 105293780 53 - TSS region transcription start site region 52311
Tssr52312 5 105294064 to 105294102 38 - TSS region transcription start site region 52312
Gbp11 5 105323042 to 105346472 23430 - polymorphic pseudogene guanylate binding protein 11
Tssr52313 5 105328957 to 105328962 5 - TSS region transcription start site region 52313
Tssr52314 5 105339050 to 105339065 15 - TSS region transcription start site region 52314
Tssr52315 5 105343242 to 105343251 9 - TSS region transcription start site region 52315
Tssr52316 5 105345927 to 105345932 5 - TSS region transcription start site region 52316
Tssr52317 5 105346479 to 105346489 10 - TSS region transcription start site region 52317
Tssr52318 5 105346519 to 105346548 29 - TSS region transcription start site region 52318
B230204H03Rik 5 105398905 to 105400155 1250 unclassified gene RIKEN cDNA B230204H03 gene
Tssr52319 5 105400103 to 105400114 11 - TSS region transcription start site region 52319
Tssr47675 5 105400408 to 105400418 10 + TSS region transcription start site region 47675
Gm26519 5 105401245 to 105406970 5725 + lincRNA gene predicted gene, 26519
Tssr47676 5 105409341 to 105409373 32 + TSS region transcription start site region 47676
Gm32051 5 105409348 to 105413922 4574 + lincRNA gene predicted gene, 32051
4930542N06Rik 5 105413286 to 105415307 2021 - lncRNA gene RIKEN cDNA 4930542N06 gene
Cpgi16151 5 105415218 to 105416501 1283 CpG island CpG island 16151
Tssr52320 5 105415687 to 105415704 17 - TSS region transcription start site region 52320
Tssr47677 5 105415690 to 105415730 40 + TSS region transcription start site region 47677
Tssr52321 5 105415718 to 105415729 11 - TSS region transcription start site region 52321
Tssr47678 5 105415738 to 105415849 111 + TSS region transcription start site region 47678
Lrrc8b 5 105415775 to 105490071 74296 + protein coding gene leucine rich repeat containing 8 family, member B
Tssr47679 5 105446871 to 105446896 25 + TSS region transcription start site region 47679
Cpgi16152 5 105479957 to 105481375 1418 CpG island CpG island 16152
Tssr47680 5 105481579 to 105481592 13 + TSS region transcription start site region 47680
Cpgi16153 5 105495231 to 105495392 161 CpG island CpG island 16153
Gm42141 5 105495422 to 105496929 1507 + lncRNA gene predicted gene, 42141
Tssr47681 5 105495455 to 105495475 20 + TSS region transcription start site region 47681
Tssr47682 5 105495540 to 105495546 6 + TSS region transcription start site region 47682
Tssr47683 5 105495599 to 105495608 9 + TSS region transcription start site region 47683
Tssr47684 5 105495620 to 105495631 11 + TSS region transcription start site region 47684
Tssr47685 5 105499619 to 105499623 4 + TSS region transcription start site region 47685
Gm42144 5 105501878 to 105504817 2939 + lncRNA gene predicted gene, 42144
Gm42142 5 105502243 to 105509547 7304 - lncRNA gene predicted gene, 42142
Tssr47686 5 105518724 to 105518738 14 + TSS region transcription start site region 47686
Cpgi16154 5 105518728 to 105520130 1402 CpG island CpG island 16154
Tssr47687 5 105518746 to 105518757 11 + TSS region transcription start site region 47687
Tssr47688 5 105518962 to 105519023 61 + TSS region transcription start site region 47688
Tssr47689 5 105519051 to 105519068 17 + TSS region transcription start site region 47689
Tssr47690 5 105519082 to 105519095 13 + TSS region transcription start site region 47690
Lrrc8c 5 105519388 to 105613018 93630 + protein coding gene leucine rich repeat containing 8 family, member C
Tssr47691 5 105519404 to 105519425 21 + TSS region transcription start site region 47691
Tssr47692 5 105519434 to 105519472 38 + TSS region transcription start site region 47692
Tssr47693 5 105519509 to 105519512 3 + TSS region transcription start site region 47693
Tssr47694 5 105531618 to 105531638 20 + TSS region transcription start site region 47694
Tssr47695 5 105558859 to 105558891 32 + TSS region transcription start site region 47695
Tssr47696 5 105560266 to 105560279 13 + TSS region transcription start site region 47696