Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:105104348-105718922

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187 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gbp9 5 105076464 to 105110352 33888 - protein coding gene guanylate-binding protein 9
Tssr52240 5 105109432 to 105109435 3 - TSS region transcription start site region 52240
Tssr52241 5 105110064 to 105110082 18 - TSS region transcription start site region 52241
Gbp4 5 105115767 to 105139586 23819 - protein coding gene guanylate binding protein 4
Tssr52242 5 105116690 to 105116700 10 - TSS region transcription start site region 52242
Tssr52243 5 105116751 to 105116763 12 - TSS region transcription start site region 52243
Tssr52244 5 105116770 to 105116801 31 - TSS region transcription start site region 52244
Tssr52245 5 105116806 to 105116822 16 - TSS region transcription start site region 52245
Tssr52246 5 105116848 to 105116856 8 - TSS region transcription start site region 52246
Tssr52247 5 105116893 to 105116894 1 - TSS region transcription start site region 52247
Tssr52248 5 105117635 to 105117647 12 - TSS region transcription start site region 52248
Tssr52249 5 105117719 to 105117734 15 - TSS region transcription start site region 52249
Tssr52250 5 105117919 to 105117929 10 - TSS region transcription start site region 52250
Tssr52251 5 105118009 to 105118016 7 - TSS region transcription start site region 52251
Tssr52252 5 105118088 to 105118095 7 - TSS region transcription start site region 52252
Tssr52253 5 105118317 to 105118326 9 - TSS region transcription start site region 52253
Tssr52254 5 105118350 to 105118361 11 - TSS region transcription start site region 52254
Tssr52255 5 105118447 to 105118457 10 - TSS region transcription start site region 52255
Tssr52256 5 105119978 to 105120011 33 - TSS region transcription start site region 52256
Tssr52257 5 105120953 to 105120983 30 - TSS region transcription start site region 52257
Tssr52258 5 105121108 to 105121120 12 - TSS region transcription start site region 52258
Tssr52259 5 105121132 to 105121143 11 - TSS region transcription start site region 52259
Tssr52260 5 105121192 to 105121236 44 - TSS region transcription start site region 52260
Tssr52261 5 105121842 to 105121866 24 - TSS region transcription start site region 52261
Tssr52262 5 105122939 to 105122954 15 - TSS region transcription start site region 52262
Tssr52263 5 105123154 to 105123158 4 - TSS region transcription start site region 52263
Tssr52264 5 105124982 to 105125015 33 - TSS region transcription start site region 52264
Tssr47671 5 105125510 to 105125544 34 + TSS region transcription start site region 47671
Tssr52265 5 105126713 to 105126716 3 - TSS region transcription start site region 52265
Tssr52266 5 105126867 to 105126878 11 - TSS region transcription start site region 52266
Tssr52267 5 105131327 to 105131332 5 - TSS region transcription start site region 52267
Tssr52268 5 105131372 to 105131386 14 - TSS region transcription start site region 52268
Tssr52269 5 105131434 to 105131461 27 - TSS region transcription start site region 52269
Tssr52270 5 105131615 to 105131623 8 - TSS region transcription start site region 52270
Tssr52271 5 105131738 to 105131741 3 - TSS region transcription start site region 52271
Tssr1571 5 105131772 to 105131786 14 - TSS region transcription start site region 1571
Tssr52272 5 105131797 to 105131804 7 - TSS region transcription start site region 52272
Tssr52273 5 105131867 to 105131882 15 - TSS region transcription start site region 52273
Tssr52274 5 105131895 to 105131913 18 - TSS region transcription start site region 52274
Tssr52275 5 105131915 to 105131938 23 - TSS region transcription start site region 52275
Tssr52276 5 105131944 to 105131972 28 - TSS region transcription start site region 52276
Tssr52277 5 105131974 to 105131988 14 - TSS region transcription start site region 52277
Tssr52278 5 105131996 to 105132015 19 - TSS region transcription start site region 52278
Tssr52279 5 105132062 to 105132077 15 - TSS region transcription start site region 52279
Tssr52280 5 105132111 to 105132128 17 - TSS region transcription start site region 52280
Tssr52281 5 105132141 to 105132159 18 - TSS region transcription start site region 52281
Tssr52282 5 105132171 to 105132176 5 - TSS region transcription start site region 52282
Tssr52283 5 105132249 to 105132262 13 - TSS region transcription start site region 52283
Tssr52284 5 105132308 to 105132319 11 - TSS region transcription start site region 52284
Tssr52285 5 105132342 to 105132351 9 - TSS region transcription start site region 52285
Tssr52286 5 105132355 to 105132381 26 - TSS region transcription start site region 52286
Tssr52287 5 105132384 to 105132396 12 - TSS region transcription start site region 52287
Tssr52288 5 105132401 to 105132410 9 - TSS region transcription start site region 52288
Tssr52289 5 105132481 to 105132490 9 - TSS region transcription start site region 52289
Tssr52290 5 105132588 to 105132597 9 - TSS region transcription start site region 52290
Tssr52291 5 105132928 to 105132939 11 - TSS region transcription start site region 52291
Tssr52292 5 105133407 to 105133419 12 - TSS region transcription start site region 52292
Tssr52293 5 105133577 to 105133601 24 - TSS region transcription start site region 52293
Tssr52294 5 105133674 to 105133692 18 - TSS region transcription start site region 52294
Tssr52295 5 105133992 to 105134003 11 - TSS region transcription start site region 52295
Tssr52296 5 105134614 to 105134617 3 - TSS region transcription start site region 52296
Tssr52297 5 105134692 to 105134706 14 - TSS region transcription start site region 52297
Tssr52298 5 105134785 to 105134795 10 - TSS region transcription start site region 52298
Tssr52299 5 105136087 to 105136108 21 - TSS region transcription start site region 52299
Tssr52300 5 105136146 to 105136152 6 - TSS region transcription start site region 52300
Tssr52301 5 105136159 to 105136166 7 - TSS region transcription start site region 52301
Tssr52302 5 105136174 to 105136206 32 - TSS region transcription start site region 52302
Tssr52303 5 105136327 to 105136342 15 - TSS region transcription start site region 52303
Tssr52304 5 105136828 to 105136849 21 - TSS region transcription start site region 52304
Tssr52305 5 105138614 to 105138642 28 - TSS region transcription start site region 52305
Gm9640 5 105157840 to 105182283 24443 - pseudogene predicted gene 9640
Tssr47672 5 105198387 to 105198410 23 + TSS region transcription start site region 47672
Tssr47673 5 105198417 to 105198431 14 + TSS region transcription start site region 47673
Gm31785 5 105198431 to 105218368 19937 + lncRNA gene predicted gene, 31785
Gm43302 5 105214907 to 105293695 78788 - protein coding gene predicted gene 43302
Gbp10 5 105215699 to 105239533 23834 - protein coding gene guanylate-binding protein 10
Tssr52306 5 105235425 to 105235430 5 - TSS region transcription start site region 52306
Tssr52307 5 105239540 to 105239545 5 - TSS region transcription start site region 52307
Gbp6 5 105270702 to 105293698 22996 - protein coding gene guanylate binding protein 6
Tssr47674 5 105274179 to 105274224 45 + TSS region transcription start site region 47674
Tssr52308 5 105281787 to 105281797 10 - TSS region transcription start site region 52308
Tssr52309 5 105288074 to 105288093 19 - TSS region transcription start site region 52309
Tssr52310 5 105293688 to 105293705 17 - TSS region transcription start site region 52310
Tssr52311 5 105293727 to 105293780 53 - TSS region transcription start site region 52311
Tssr52312 5 105294064 to 105294102 38 - TSS region transcription start site region 52312
Gbp11 5 105323042 to 105346472 23430 - polymorphic pseudogene guanylate binding protein 11
Tssr52313 5 105328957 to 105328962 5 - TSS region transcription start site region 52313
Tssr52314 5 105339050 to 105339065 15 - TSS region transcription start site region 52314
Tssr52315 5 105343242 to 105343251 9 - TSS region transcription start site region 52315
Tssr52316 5 105345927 to 105345932 5 - TSS region transcription start site region 52316
Tssr52317 5 105346479 to 105346489 10 - TSS region transcription start site region 52317
Tssr52318 5 105346519 to 105346548 29 - TSS region transcription start site region 52318
B230204H03Rik 5 105398905 to 105400155 1250 unclassified gene RIKEN cDNA B230204H03 gene
Tssr52319 5 105400103 to 105400114 11 - TSS region transcription start site region 52319
Tssr47675 5 105400408 to 105400418 10 + TSS region transcription start site region 47675
Gm26519 5 105401245 to 105406970 5725 + lincRNA gene predicted gene, 26519
Tssr47676 5 105409341 to 105409373 32 + TSS region transcription start site region 47676
Gm32051 5 105409348 to 105413922 4574 + lincRNA gene predicted gene, 32051
4930542N06Rik 5 105413286 to 105415307 2021 - lncRNA gene RIKEN cDNA 4930542N06 gene
Cpgi16151 5 105415218 to 105416501 1283 CpG island CpG island 16151
Tssr52320 5 105415687 to 105415704 17 - TSS region transcription start site region 52320
Tssr47677 5 105415690 to 105415730 40 + TSS region transcription start site region 47677
Tssr52321 5 105415718 to 105415729 11 - TSS region transcription start site region 52321
Tssr47678 5 105415738 to 105415849 111 + TSS region transcription start site region 47678
Lrrc8b 5 105415775 to 105490071 74296 + protein coding gene leucine rich repeat containing 8 family, member B
Tssr47679 5 105446871 to 105446896 25 + TSS region transcription start site region 47679
Cpgi16152 5 105479957 to 105481375 1418 CpG island CpG island 16152
Tssr47680 5 105481579 to 105481592 13 + TSS region transcription start site region 47680
Cpgi16153 5 105495231 to 105495392 161 CpG island CpG island 16153
Gm42141 5 105495422 to 105496929 1507 + lncRNA gene predicted gene, 42141
Tssr47681 5 105495455 to 105495475 20 + TSS region transcription start site region 47681
Tssr47682 5 105495540 to 105495546 6 + TSS region transcription start site region 47682
Tssr47683 5 105495599 to 105495608 9 + TSS region transcription start site region 47683
Tssr47684 5 105495620 to 105495631 11 + TSS region transcription start site region 47684
Tssr47685 5 105499619 to 105499623 4 + TSS region transcription start site region 47685
Gm42144 5 105501878 to 105504817 2939 + lncRNA gene predicted gene, 42144
Gm42142 5 105502243 to 105509547 7304 - lncRNA gene predicted gene, 42142
Tssr47686 5 105518724 to 105518738 14 + TSS region transcription start site region 47686
Cpgi16154 5 105518728 to 105520130 1402 CpG island CpG island 16154
Tssr47687 5 105518746 to 105518757 11 + TSS region transcription start site region 47687
Tssr47688 5 105518962 to 105519023 61 + TSS region transcription start site region 47688
Tssr47689 5 105519051 to 105519068 17 + TSS region transcription start site region 47689
Tssr47690 5 105519082 to 105519095 13 + TSS region transcription start site region 47690
Lrrc8c 5 105519388 to 105613018 93630 + protein coding gene leucine rich repeat containing 8 family, member C
Tssr47691 5 105519404 to 105519425 21 + TSS region transcription start site region 47691
Tssr47692 5 105519434 to 105519472 38 + TSS region transcription start site region 47692
Tssr47693 5 105519509 to 105519512 3 + TSS region transcription start site region 47693
Tssr47694 5 105531618 to 105531638 20 + TSS region transcription start site region 47694
Tssr47695 5 105558859 to 105558891 32 + TSS region transcription start site region 47695
Tssr47696 5 105560266 to 105560279 13 + TSS region transcription start site region 47696
Tssr47697 5 105571268 to 105571272 4 + TSS region transcription start site region 47697
Tssr47698 5 105579484 to 105579503 19 + TSS region transcription start site region 47698
Tssr47699 5 105579525 to 105579533 8 + TSS region transcription start site region 47699
Tssr47700 5 105579535 to 105579561 26 + TSS region transcription start site region 47700
Tssr47701 5 105579567 to 105579577 10 + TSS region transcription start site region 47701
C230066G23Rik 5 105580440 to 105581772 1332 + sense intronic lncRNA gene RIKEN cDNA C230066G23 gene
Tssr47702 5 105589792 to 105589794 2 + TSS region transcription start site region 47702
Tssr47703 5 105591215 to 105591240 25 + TSS region transcription start site region 47703
Tssr47704 5 105591292 to 105591300 8 + TSS region transcription start site region 47704
Tssr47705 5 105591302 to 105591334 32 + TSS region transcription start site region 47705
Tssr47706 5 105591348 to 105591375 27 + TSS region transcription start site region 47706
Tssr47707 5 105591441 to 105591508 67 + TSS region transcription start site region 47707
Tssr47708 5 105591640 to 105591651 11 + TSS region transcription start site region 47708
Tssr47709 5 105596092 to 105596121 29 + TSS region transcription start site region 47709
Tssr47710 5 105599555 to 105599586 31 + TSS region transcription start site region 47710
Tssr47711 5 105599616 to 105599621 5 + TSS region transcription start site region 47711
Tssr47712 5 105606576 to 105606591 15 + TSS region transcription start site region 47712
Tssr47713 5 105607347 to 105607372 25 + TSS region transcription start site region 47713
Tssr47714 5 105608374 to 105608390 16 + TSS region transcription start site region 47714
Tssr47715 5 105609402 to 105609413 11 + TSS region transcription start site region 47715
Tssr47716 5 105610318 to 105610323 5 + TSS region transcription start site region 47716
Tssr47717 5 105610968 to 105610972 4 + TSS region transcription start site region 47717
Tssr47718 5 105621037 to 105621046 9 + TSS region transcription start site region 47718
Gm32230 5 105640112 to 105643799 3687 - lncRNA gene predicted gene, 32230
Tssr52322 5 105642682 to 105642697 15 - TSS region transcription start site region 52322
Tssr52323 5 105651067 to 105651070 3 - TSS region transcription start site region 52323
Gm32276 5 105651306 to 105662431 11125 + lncRNA gene predicted gene, 32276
Tssr47719 5 105651322 to 105651362 40 + TSS region transcription start site region 47719
Tssr47720 5 105684346 to 105684361 15 + TSS region transcription start site region 47720
Tssr52324 5 105693396 to 105693439 43 - TSS region transcription start site region 52324
Gm42166 5 105693704 to 105704716 11012 - protein coding gene predicted gene, 42166
Tssr52325 5 105693976 to 105693999 23 - TSS region transcription start site region 52325
Tssr1572 5 105696131 to 105696144 13 - TSS region transcription start site region 1572
Tssr52326 5 105696154 to 105696179 25 - TSS region transcription start site region 52326
Tssr47721 5 105696290 to 105696301 11 + TSS region transcription start site region 47721
Tssr47722 5 105698899 to 105698920 21 + TSS region transcription start site region 47722
Tssr52327 5 105699242 to 105699250 8 - TSS region transcription start site region 52327
Cpgi16155 5 105699299 to 105700963 1664 CpG island CpG island 16155
Tssr47723 5 105699945 to 105700041 96 + TSS region transcription start site region 47723
Lrrc8d 5 105699969 to 105815215 115246 + protein coding gene leucine rich repeat containing 8D
Tssr47724 5 105700214 to 105700223 9 + TSS region transcription start site region 47724
Tssr52328 5 105700568 to 105700585 17 - TSS region transcription start site region 52328
Tssr52329 5 105700665 to 105700698 33 - TSS region transcription start site region 52329
Tssr47725 5 105700740 to 105700752 12 + TSS region transcription start site region 47725
Tssr47726 5 105700758 to 105700835 77 + TSS region transcription start site region 47726
Tssr47727 5 105700838 to 105700871 33 + TSS region transcription start site region 47727
Tssr47728 5 105700882 to 105700893 11 + TSS region transcription start site region 47728
Tssr47729 5 105700902 to 105700914 12 + TSS region transcription start site region 47729
Tssr47730 5 105701410 to 105701416 6 + TSS region transcription start site region 47730
Tssr52330 5 105701529 to 105701569 40 - TSS region transcription start site region 52330
Tssr52331 5 105702005 to 105702012 7 - TSS region transcription start site region 52331
Tssr52332 5 105702038 to 105702045 7 - TSS region transcription start site region 52332
Tssr47731 5 105702151 to 105702189 38 + TSS region transcription start site region 47731
Tssr1573 5 105702702 to 105702738 36 - TSS region transcription start site region 1573
Tssr52333 5 105718225 to 105718236 11 - TSS region transcription start site region 52333
Tssr52334 5 105718267 to 105718274 7 - TSS region transcription start site region 52334
Tssr47732 5 105718658 to 105718697 39 + TSS region transcription start site region 47732