Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104639869-105110385

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm31345 5 104647147 to 104647689 542 - pseudogene predicted gene, 31345
Gm20385 5 104661551 to 104692067 30516 + protein coding gene predicted gene, 20385
Tssr47670 5 104662335 to 104662349 14 + TSS region transcription start site region 47670
Gm3196 5 104704370 to 104752481 48111 - pseudogene predicted gene 3196
D5Mit365 5 104717529 to 104717627 98 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 365
D5Mit365.2 5 104717599 to 104717725 126 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 365.2
Gm31526 5 104722968 to 104751226 28258 + protein coding gene predicted gene, 31526
Gm19949 5 104756764 to 104757287 523 - pseudogene predicted gene, 19949
Gm8258 5 104775779 to 104777227 1448 + pseudogene predicted gene 8258
Zfp951 5 104813169 to 104860070 46901 - protein coding gene zinc finger protein 951
Tssr52229 5 104859791 to 104859805 14 - TSS region transcription start site region 52229
Gm45932 5 104874869 to 104875385 516 + pseudogene predicted gene, 45932
Gm29714 5 104879585 to 104880386 801 + pseudogene predicted gene, 29714
Gm29716 5 104882670 to 104934952 52282 - protein coding gene predicted gene, 29716
Cpgi16150 5 104927732 to 104928575 843 CpG island CpG island 16150
Abcg3 5 104935057 to 104982718 47661 - protein coding gene ATP binding cassette subfamily G member 3
Gm24097 5 104936651 to 104936757 106 + snRNA gene predicted gene, 24097
Gm43856 5 104971695 to 104972063 368 - unclassified gene predicted gene 43856
Tssr52230 5 104982656 to 104982714 58 - TSS region transcription start site region 52230
Gm43855 5 104987237 to 104987743 506 - pseudogene predicted gene 43855
Gm5870 5 104989050 to 104989331 281 - pseudogene predicted pseudogene 5870
Tssr52231 5 104989349 to 104989371 22 - TSS region transcription start site region 52231
Gbp8 5 105012513 to 105053609 41096 - protein coding gene guanylate-binding protein 8
Tssr52232 5 105021896 to 105021909 13 - TSS region transcription start site region 52232
Tssr52233 5 105030699 to 105030711 12 - TSS region transcription start site region 52233
Gbp9 5 105076464 to 105110352 33888 - protein coding gene guanylate-binding protein 9
Tssr52234 5 105078514 to 105078544 30 - TSS region transcription start site region 52234
Tssr52235 5 105082750 to 105082783 33 - TSS region transcription start site region 52235
Tssr52236 5 105083763 to 105083806 43 - TSS region transcription start site region 52236
Tssr52237 5 105101615 to 105101626 11 - TSS region transcription start site region 52237
Tssr52238 5 105102229 to 105102233 4 - TSS region transcription start site region 52238
Tssr52239 5 105103840 to 105103842 2 - TSS region transcription start site region 52239
Tssr52240 5 105109432 to 105109435 3 - TSS region transcription start site region 52240
Tssr52241 5 105110064 to 105110082 18 - TSS region transcription start site region 52241