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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104476764-105037287

Filter by:
39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkd2 5 104459450 to 104505819 46369 + protein coding gene polycystic kidney disease 2
Cpgi16148 5 104478825 to 104479169 344 CpG island CpG island 16148
Cpgi16149 5 104508192 to 104508939 747 CpG island CpG island 16149
Tssr47665 5 104508338 to 104508392 54 + TSS region transcription start site region 47665
BC005561 5 104508352 to 104522383 14031 + protein coding gene cDNA sequence BC005561
Tssr47666 5 104508398 to 104508410 12 + TSS region transcription start site region 47666
Tssr47667 5 104508572 to 104508575 3 + TSS region transcription start site region 47667
D930016D06Rik 5 104525735 to 104554207 28472 + lincRNA gene RIKEN cDNA D930016D06 gene
Zfp33b 5 104570778 to 104639143 68365 + protein coding gene zinc finger protein 33B
Tssr1570 5 104571390 to 104571391 1 + TSS region transcription start site region 1570
Tssr47668 5 104571665 to 104571694 29 + TSS region transcription start site region 47668
Gm46930 5 104583369 to 104584102 733 - pseudogene predicted gene, 46930
Gm45931 5 104601536 to 104602062 526 - pseudogene predicted gene, 45931
Tssr47669 5 104609390 to 104609436 46 + TSS region transcription start site region 47669
Gm31345 5 104647147 to 104647689 542 - pseudogene predicted gene, 31345
Gm20385 5 104661551 to 104692067 30516 + protein coding gene predicted gene, 20385
Tssr47670 5 104662335 to 104662349 14 + TSS region transcription start site region 47670
Gm3196 5 104704370 to 104752481 48111 - pseudogene predicted gene 3196
D5Mit365 5 104717529 to 104717627 98 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 365
D5Mit365.2 5 104717599 to 104717725 126 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 365.2
Gm31526 5 104722968 to 104751226 28258 + protein coding gene predicted gene, 31526
Gm19949 5 104756764 to 104757287 523 - pseudogene predicted gene, 19949
Gm8258 5 104775779 to 104777227 1448 + pseudogene predicted gene 8258
Zfp951 5 104813169 to 104860070 46901 - protein coding gene zinc finger protein 951
Tssr52229 5 104859791 to 104859805 14 - TSS region transcription start site region 52229
Gm45932 5 104874869 to 104875385 516 + pseudogene predicted gene, 45932
Gm29714 5 104879585 to 104880386 801 + pseudogene predicted gene, 29714
Gm29716 5 104882670 to 104934952 52282 - protein coding gene predicted gene, 29716
Cpgi16150 5 104927732 to 104928575 843 CpG island CpG island 16150
Abcg3 5 104935057 to 104982718 47661 - protein coding gene ATP binding cassette subfamily G member 3
Gm24097 5 104936651 to 104936757 106 + snRNA gene predicted gene, 24097
Gm43856 5 104971695 to 104972063 368 - unclassified gene predicted gene 43856
Tssr52230 5 104982656 to 104982714 58 - TSS region transcription start site region 52230
Gm43855 5 104987237 to 104987743 506 - pseudogene predicted gene 43855
Gm5870 5 104989050 to 104989331 281 - pseudogene predicted pseudogene 5870
Tssr52231 5 104989349 to 104989371 22 - TSS region transcription start site region 52231
Gbp8 5 105012513 to 105053609 41096 - protein coding gene guanylate-binding protein 8
Tssr52232 5 105021896 to 105021909 13 - TSS region transcription start site region 52232
Tssr52233 5 105030699 to 105030711 12 - TSS region transcription start site region 52233