Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104443369-104724102

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16147 5 104459297 to 104460483 1186 CpG island CpG island 16147
Pkd2 5 104459450 to 104505819 46369 + protein coding gene polycystic kidney disease 2
Tssr47661 5 104459539 to 104459580 41 + TSS region transcription start site region 47661
Tssr47662 5 104459589 to 104459610 21 + TSS region transcription start site region 47662
Tssr47663 5 104459621 to 104459642 21 + TSS region transcription start site region 47663
Tssr47664 5 104459643 to 104459654 11 + TSS region transcription start site region 47664
Tssr52226 5 104460255 to 104460279 24 - TSS region transcription start site region 52226
Tssr52227 5 104460329 to 104460355 26 - TSS region transcription start site region 52227
Tssr52228 5 104460362 to 104460383 21 - TSS region transcription start site region 52228
Cpgi16148 5 104478825 to 104479169 344 CpG island CpG island 16148
Cpgi16149 5 104508192 to 104508939 747 CpG island CpG island 16149
Tssr47665 5 104508338 to 104508392 54 + TSS region transcription start site region 47665
BC005561 5 104508352 to 104522383 14031 + protein coding gene cDNA sequence BC005561
Tssr47666 5 104508398 to 104508410 12 + TSS region transcription start site region 47666
Tssr47667 5 104508572 to 104508575 3 + TSS region transcription start site region 47667
D930016D06Rik 5 104525735 to 104554207 28472 + lincRNA gene RIKEN cDNA D930016D06 gene
Zfp33b 5 104570778 to 104639143 68365 + protein coding gene zinc finger protein 33B
Tssr1570 5 104571390 to 104571391 1 + TSS region transcription start site region 1570
Tssr47668 5 104571665 to 104571694 29 + TSS region transcription start site region 47668
Gm46930 5 104583369 to 104584102 733 - pseudogene predicted gene, 46930
Gm45931 5 104601536 to 104602062 526 - pseudogene predicted gene, 45931
Tssr47669 5 104609390 to 104609436 46 + TSS region transcription start site region 47669
Gm31345 5 104647147 to 104647689 542 - pseudogene predicted gene, 31345
Gm20385 5 104661551 to 104692067 30516 + protein coding gene predicted gene, 20385
Tssr47670 5 104662335 to 104662349 14 + TSS region transcription start site region 47670
Gm3196 5 104704370 to 104752481 48111 - pseudogene predicted gene 3196
D5Mit365 5 104717529 to 104717627 98 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 365
D5Mit365.2 5 104717599 to 104717725 126 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 365.2
Gm31526 5 104722968 to 104751226 28258 + protein coding gene predicted gene, 31526