Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104260076-104360098

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23616 5 104297188 to 104297297 109 + miRNA gene predicted gene, 23616
Tssr47627 5 104299281 to 104299296 15 + TSS region transcription start site region 47627
Ibsp 5 104299287 to 104311472 12185 + protein coding gene integrin binding sialoprotein
Tssr47628 5 104302450 to 104302462 12 + TSS region transcription start site region 47628
Tssr47629 5 104309311 to 104309322 11 + TSS region transcription start site region 47629
Tssr47630 5 104309327 to 104309346 19 + TSS region transcription start site region 47630
Tssr47631 5 104309365 to 104309400 35 + TSS region transcription start site region 47631
Tssr52219 5 104310076 to 104310098 22 - TSS region transcription start site region 52219
Cpgi16146 5 104310082 to 104310497 415 CpG island CpG island 16146
Tssr52220 5 104310113 to 104310136 23 - TSS region transcription start site region 52220
Mepe 5 104325329 to 104338611 13282 + protein coding gene matrix extracellular phosphoglycoprotein with ASARM motif (bone)
Tssr47632 5 104325360 to 104325368 8 + TSS region transcription start site region 47632
Tssr47633 5 104349134 to 104349145 11 + TSS region transcription start site region 47633
D5Mit41 5 104350872 to 104351018 146 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 41
Diht 5 104350872 to 114963481 10612609 QTL dopamine-induced hypothermia
Tssr52221 5 104358732 to 104358742 10 - TSS region transcription start site region 52221