Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:104134313-104351702

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D5Mit363 5 104139201 to 104139450 249 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 363
Gm3157 5 104144554 to 104146300 1746 - pseudogene predicted gene 3157
Tssr47625 5 104170676 to 104170699 23 + TSS region transcription start site region 47625
Dspp 5 104170712 to 104180127 9415 + protein coding gene dentin sialophosphoprotein
Tssr47626 5 104202609 to 104202624 15 + TSS region transcription start site region 47626
Dmp1 5 104202613 to 104214102 11489 + protein coding gene dentin matrix protein 1
Cpgi16145 5 104211657 to 104212354 697 CpG island CpG island 16145
Chldq12 5 104239005 to 104239199 194 QTL cholesterol and HDL QTL 12
Cpfd3 5 104239005 to 104239199 194 QTL cerebellum pattern fissures, declival 3
D5Mit10 5 104239005 to 104239199 194 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 10
Ahl18 5 104239005 to 104239199 194 QTL age related hearing loss, early onset 18
Bwem1 5 104239005 to 104239199 194 QTL body weight day 30 males 1
Vng 5 104239005 to 126924008 22685003 heritable phenotypic marker van gogh
Sluc33 5 104239005 to 120573921 16334916 QTL susceptibility to lung cancer 33
Drb2 5 104239005 to 104239199 194 QTL dopamine receptor binding 2
Tir5 5 104239199 to 63548099 -40691100 QTL trypanosome infection response 5
Gm31048 5 104239313 to 104246702 7389 - lincRNA gene predicted gene, 31048
D5Mit400 5 104241870 to 104242043 173 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 400
Gm23616 5 104297188 to 104297297 109 + miRNA gene predicted gene, 23616
Tssr47627 5 104299281 to 104299296 15 + TSS region transcription start site region 47627
Ibsp 5 104299287 to 104311472 12185 + protein coding gene integrin binding sialoprotein
Tssr47628 5 104302450 to 104302462 12 + TSS region transcription start site region 47628
Tssr47629 5 104309311 to 104309322 11 + TSS region transcription start site region 47629
Tssr47630 5 104309327 to 104309346 19 + TSS region transcription start site region 47630
Tssr47631 5 104309365 to 104309400 35 + TSS region transcription start site region 47631
Tssr52219 5 104310076 to 104310098 22 - TSS region transcription start site region 52219
Cpgi16146 5 104310082 to 104310497 415 CpG island CpG island 16146
Tssr52220 5 104310113 to 104310136 23 - TSS region transcription start site region 52220
Mepe 5 104325329 to 104338611 13282 + protein coding gene matrix extracellular phosphoglycoprotein with ASARM motif (bone)
Tssr47632 5 104325360 to 104325368 8 + TSS region transcription start site region 47632
Tssr47633 5 104349134 to 104349145 11 + TSS region transcription start site region 47633
D5Mit41 5 104350872 to 104351018 146 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 41
Diht 5 104350872 to 114963481 10612609 QTL dopamine-induced hypothermia