Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:103754908-104005235

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aff1 5 103692374 to 103855322 162948 + protein coding gene AF4/FMR2 family, member 1
Tssr47604 5 103780243 to 103780245 2 + TSS region transcription start site region 47604
Tssr47605 5 103782068 to 103782071 3 + TSS region transcription start site region 47605
Tssr47606 5 103783811 to 103783830 19 + TSS region transcription start site region 47606
Tssr47607 5 103784150 to 103784162 12 + TSS region transcription start site region 47607
Tssr47608 5 103784233 to 103784275 42 + TSS region transcription start site region 47608
Tssr47609 5 103784416 to 103784429 13 + TSS region transcription start site region 47609
Tssr52170 5 103795185 to 103795190 5 - TSS region transcription start site region 52170
Tssr47610 5 103804794 to 103804808 14 + TSS region transcription start site region 47610
Tssr47611 5 103814977 to 103815007 30 + TSS region transcription start site region 47611
Tssr47612 5 103824451 to 103824456 5 + TSS region transcription start site region 47612
Tssr47613 5 103846362 to 103846371 9 + TSS region transcription start site region 47613
Tssr47614 5 103846592 to 103846596 4 + TSS region transcription start site region 47614
Klhl8 5 103862050 to 103911272 49222 - protein coding gene kelch-like 8
Gm42139 5 103877662 to 103891530 13868 + lncRNA gene predicted gene, 42139
Gm43547 5 103879908 to 103880235 327 - unclassified gene predicted gene 43547
Tssr52171 5 103886045 to 103886093 48 - TSS region transcription start site region 52171
Gm24897 5 103898879 to 103898985 106 + snRNA gene predicted gene, 24897
D5Mit404 5 103908168 to 103908290 122 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 404
Cpgi16139 5 103910672 to 103911721 1049 CpG island CpG island 16139
Tssr52172 5 103911196 to 103911275 79 - TSS region transcription start site region 52172
Cpgi16140 5 103927624 to 103927845 221 CpG island CpG island 16140
Hsd17b13 5 103955442 to 103977388 21946 - protein coding gene hydroxysteroid (17-beta) dehydrogenase 13
Tssr52173 5 103967041 to 103967046 5 - TSS region transcription start site region 52173
Tssr52174 5 103970842 to 103970848 6 - TSS region transcription start site region 52174
Tssr52175 5 103977339 to 103977356 17 - TSS region transcription start site region 52175
Tssr52176 5 103977360 to 103977403 43 - TSS region transcription start site region 52176
Tssr52177 5 103977404 to 103977415 11 - TSS region transcription start site region 52177
Tssr47615 5 103982931 to 103982935 4 + TSS region transcription start site region 47615
Gm8200 5 103989370 to 103989591 221 + pseudogene predicted gene 8200
Hsd17b11 5 103989765 to 104021796 32031 - protein coding gene hydroxysteroid (17-beta) dehydrogenase 11
Tssr52178 5 103990238 to 103990243 5 - TSS region transcription start site region 52178
D5Mit275 5 103997680 to 103997803 123 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 275