MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:103555711-103679403

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ptpn13	5	103425192 to 103598303	173111	+	protein coding gene	protein tyrosine phosphatase, non-receptor type 13
Tssr47567	5	103557909 to 103557927	18	+	TSS region	transcription start site region 47567
D5Mit93	5	103584813 to 103585005	192		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 93
Gm23085	5	103602587 to 103602879	292	+	unclassified non-coding RNA gene	predicted gene, 23085
Slc10a6	5	103605711 to 103629403	23692	-	protein coding gene	solute carrier family 10 (sodium/bile acid cotransporter family), member 6
Gm15844	5	103624471 to 103625046	575	+	pseudogene	predicted gene 15844
Tssr52162	5	103629236 to 103629269	33	-	TSS region	transcription start site region 52162
Tssr52163	5	103629279 to 103629296	17	-	TSS region	transcription start site region 52163
Gm43546	5	103635225 to 103636167	942	+	unclassified gene	predicted gene 43546
Tssr52164	5	103647470 to 103647479	9	-	TSS region	transcription start site region 52164
Tssr52165	5	103647493 to 103647505	12	-	TSS region	transcription start site region 52165
1700016H13Rik	5	103648583 to 103655860	7277	-	protein coding gene	RIKEN cDNA 1700016H13 gene
Cpgi16136	5	103655351 to 103656040	689		CpG island	CpG island 16136
Tssr52166	5	103655709 to 103655743	34	-	TSS region	transcription start site region 52166
Tssr52167	5	103655744 to 103655751	7	-	TSS region	transcription start site region 52167
Gm42138	5	103656082 to 103666572	10490	+	lncRNA gene	predicted gene, 42138
Gm25721	5	103658237 to 103658407	170	+	snRNA gene	predicted gene, 25721