MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:101933018-102173033

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Wdfy3	5	101832956 to 102069921	236965	-	protein coding gene	WD repeat and FYVE domain containing 3
Gm42135	5	101947699 to 101956607	8908	+	lncRNA gene	predicted gene, 42135
Gm42934	5	101956607 to 101957951	1344	+	unclassified gene	predicted gene 42934
Tssr47509	5	101968742 to 101968779	37	+	TSS region	transcription start site region 47509
Tssr52136	5	102018389 to 102018393	4	-	TSS region	transcription start site region 52136
Tssr52137	5	102053018 to 102053033	15	-	TSS region	transcription start site region 52137
Tssr52138	5	102053039 to 102053087	48	-	TSS region	transcription start site region 52138
Gm43787	5	102057033 to 102058069	1036	-	unclassified gene	predicted gene 43787
Cpgi16128	5	102068955 to 102070645	1690		CpG island	CpG island 16128
Tssr52139	5	102069905 to 102069940	35	-	TSS region	transcription start site region 52139
Tssr47510	5	102070062 to 102070105	43	+	TSS region	transcription start site region 47510
Gm29707	5	102070218 to 102071782	1564	+	lincRNA gene	predicted gene, 29707
Tssr47511	5	102070839 to 102070850	11	+	TSS region	transcription start site region 47511
Tssr52140	5	102072135 to 102072204	69	-	TSS region	transcription start site region 52140
Gm42136	5	102119622 to 102121795	2173	-	lncRNA gene	predicted gene, 42136
D5Mit276	5	102139540 to 102139680	140		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 276
Gm17978	5	102159532 to 102160294	762	+	pseudogene	predicted gene, 17978
Gm42933	5	102162291 to 102164359	2068	+	pseudogene	predicted gene 42933