Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:101559184-101764711

20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm29982	5	101586427 to 101599253	12826	-	lncRNA gene	predicted gene, 29982
Gm20484	5	101599314 to 101602375	3061	+	lincRNA gene	predicted gene 20484
Cpgi16120	5	101647552 to 101648616	1064		CpG island	CpG island 16120
Gm42132	5	101650294 to 101657178	6884	-	lncRNA gene	predicted gene, 42132
Cpgi16121	5	101658928 to 101659923	995		CpG island	CpG island 16121
Nkx6-1	5	101659184 to 101664711	5527	-	protein coding gene	NK6 homeobox 1
Tssr47497	5	101659206 to 101659215	9	+	TSS region	transcription start site region 47497
Cpgi16122	5	101661775 to 101662102	327		CpG island	CpG island 16122
Cpgi16123	5	101662964 to 101665798	2834		CpG island	CpG island 16123
Tssr52127	5	101665195 to 101665211	16	-	TSS region	transcription start site region 52127
Tssr52128	5	101665247 to 101665254	7	-	TSS region	transcription start site region 52128
Cpgi16124	5	101666845 to 101667121	276		CpG island	CpG island 16124
Cpgi16125	5	101688611 to 101688827	216		CpG island	CpG island 16125
Gm42133	5	101698136 to 101700077	1941	-	lincRNA gene	predicted gene, 42133
Cpgi16126	5	101703521 to 101703752	231		CpG island	CpG island 16126
Tssr1559	5	101703578 to 101703615	37	+	TSS region	transcription start site region 1559
9430085M18Rik	5	101703586 to 101705850	2264	+	lincRNA gene	RIKEN cDNA 9430085M18 gene
Tssr47498	5	101720778 to 101720782	4	+	TSS region	transcription start site region 47498
Gm42134	5	101723095 to 101742952	19857	-	lncRNA gene	predicted gene, 42134
Cpgi16127	5	101764579 to 101765933	1354		CpG island	CpG island 16127