Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:101305528-101706329

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cycs-ps2 5 101305578 to 101305869 291 + pseudogene cytochrome c, pseudogene 2
Gm42131 5 101446465 to 101449466 3001 - lncRNA gene predicted gene, 42131
Gm43103 5 101505528 to 101506329 801 - pseudogene predicted gene 43103
D5Mit156 5 101537451 to 101537557 106 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 156
Gm29982 5 101586427 to 101599253 12826 - lncRNA gene predicted gene, 29982
Gm20484 5 101599314 to 101602375 3061 + lincRNA gene predicted gene 20484
Cpgi16120 5 101647552 to 101648616 1064 CpG island CpG island 16120
Gm42132 5 101650294 to 101657178 6884 - lncRNA gene predicted gene, 42132
Cpgi16121 5 101658928 to 101659923 995 CpG island CpG island 16121
Nkx6-1 5 101659184 to 101664711 5527 - protein coding gene NK6 homeobox 1
Tssr47497 5 101659206 to 101659215 9 + TSS region transcription start site region 47497
Cpgi16122 5 101661775 to 101662102 327 CpG island CpG island 16122
Cpgi16123 5 101662964 to 101665798 2834 CpG island CpG island 16123
Tssr52127 5 101665195 to 101665211 16 - TSS region transcription start site region 52127
Tssr52128 5 101665247 to 101665254 7 - TSS region transcription start site region 52128
Cpgi16124 5 101666845 to 101667121 276 CpG island CpG island 16124
Cpgi16125 5 101688611 to 101688827 216 CpG island CpG island 16125
Gm42133 5 101698136 to 101700077 1941 - lincRNA gene predicted gene, 42133
Cpgi16126 5 101703521 to 101703752 231 CpG island CpG island 16126
Tssr1559 5 101703578 to 101703615 37 + TSS region transcription start site region 1559
9430085M18Rik 5 101703586 to 101705850 2264 + lincRNA gene RIKEN cDNA 9430085M18 gene